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2VKU

4,4'-Dihydroxybenzophenone Mimics Sterol Substrate in the Binding Site of Sterol 14alpha-Demethylase (CYP51) in the X-ray Structure of the Complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0004497molecular_functionmonooxygenase activity
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006629biological_processlipid metabolic process
A0006694biological_processsteroid biosynthetic process
A0008202biological_processsteroid metabolic process
A0008398molecular_functionsterol 14-demethylase activity
A0016125biological_processsterol metabolic process
A0016126biological_processsterol biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBE A1446
ChainResidue
AHIS16
AGLY107
AMET110
ALEU179
APRO187
AALA398
AHOH2514
AHOH2515

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBE A1447
ChainResidue
AMET99
AMET225
APHE241
AMET249
ASER252
AMET253
AHEM1450
AARG96

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE DBE A1448
ChainResidue
AARG192
AGLU308
ALYS312
APHE387
AGLY388
AARG393
AILE401
ASO41452
AHOH2518

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE DBE A1449
ChainResidue
ATYR76
AMET79
APHE83
AARG96
APHE255
AHIS259
AILE323
AMET433
AHEM1450
AHOH2367

site_idAC5
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEM A1450
ChainResidue
ATYR76
AARG96
AALA256
AGLY257
ATHR260
ASER261
ATHR264
APRO320
ALEU321
ALEU324
AARG326
APRO386
APHE387
AGLY388
ACYS394
APHE399
ADBE1447
ADBE1449
AHOH2098
AHOH2316
AHOH2445

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A1452
ChainResidue
AARG193
AARG381
AALA389
AGLY390
AARG393
ADBE1448
AHOH2254
AHOH2437
AHOH2502

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1453
ChainResidue
AARG64
AARG193
AARG381
AHOH2503

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A1454
ChainResidue
ATHR236
AGLY237
AARG294
AHOH2505
AHOH2506
AHOH2507
AHOH2508
AHOH2509

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A1455
ChainResidue
AARG23
AHIS101
AARG106
AGLY107
AHOH2146
AHOH2511

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1456
ChainResidue
AHIS275
AARG276
AASP277
AALA278

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A1457
ChainResidue
AARG174
ALYS432
AHOH2513

Functional Information from PROSITE/UniProt
site_idPS00086
Number of Residues10
DetailsCYTOCHROME_P450 Cytochrome P450 cysteine heme-iron ligand signature. FGaGRHRCVG
ChainResidueDetails
APHE387-GLY396

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11248033","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15530358","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17846131","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18367444","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19190730","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JUL-2004","submissionDatabase":"PDB data bank","title":"Crystal structure analysis of the C37L/C151T/C442A-triple mutant of CYP51 from Mycobacterium tuberculosis.","authors":["Podust L.M.","Yermalitskaya L.V.","Kim Y.","Waterman M.R."]}},{"source":"PDB","id":"1E9X","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8V","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"description":"axial binding residue","evidences":[{"source":"PubMed","id":"11248033","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15530358","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17846131","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18367444","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19190730","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JUL-2004","submissionDatabase":"PDB data bank","title":"Crystal structure analysis of the C37L/C151T/C442A-triple mutant of CYP51 from Mycobacterium tuberculosis.","authors":["Podust L.M.","Yermalitskaya L.V.","Kim Y.","Waterman M.R."]}},{"source":"PDB","id":"1E9X","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8V","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1akd
ChainResidueDetails
AHIS259
ATHR260

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PDB entries from 2025-12-17

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