2VKR
3Fe-4S, 4Fe-4S plus Zn Acidianus ambivalens ferredoxin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008270 | molecular_function | zinc ion binding |
A | 0009055 | molecular_function | electron transfer activity |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
B | 0008270 | molecular_function | zinc ion binding |
B | 0009055 | molecular_function | electron transfer activity |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
C | 0008270 | molecular_function | zinc ion binding |
C | 0009055 | molecular_function | electron transfer activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0051536 | molecular_function | iron-sulfur cluster binding |
C | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
C | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
D | 0008270 | molecular_function | zinc ion binding |
D | 0009055 | molecular_function | electron transfer activity |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0051536 | molecular_function | iron-sulfur cluster binding |
D | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
D | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
E | 0008270 | molecular_function | zinc ion binding |
E | 0009055 | molecular_function | electron transfer activity |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0046872 | molecular_function | metal ion binding |
E | 0051536 | molecular_function | iron-sulfur cluster binding |
E | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
E | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
F | 0008270 | molecular_function | zinc ion binding |
F | 0009055 | molecular_function | electron transfer activity |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0046872 | molecular_function | metal ion binding |
F | 0051536 | molecular_function | iron-sulfur cluster binding |
F | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
F | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
G | 0008270 | molecular_function | zinc ion binding |
G | 0009055 | molecular_function | electron transfer activity |
G | 0016491 | molecular_function | oxidoreductase activity |
G | 0046872 | molecular_function | metal ion binding |
G | 0051536 | molecular_function | iron-sulfur cluster binding |
G | 0051538 | molecular_function | 3 iron, 4 sulfur cluster binding |
G | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE F3S A 104 |
Chain | Residue |
A | CYS45 |
A | ILE46 |
A | ASP48 |
A | GLY49 |
A | SER50 |
A | CYS51 |
A | CYS93 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 A 105 |
Chain | Residue |
A | CYS83 |
A | ILE84 |
A | CYS86 |
A | MET87 |
A | CYS89 |
A | CYS55 |
A | VAL59 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 106 |
Chain | Residue |
A | HIS16 |
A | HIS19 |
A | HIS34 |
A | ASP76 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE F3S B 104 |
Chain | Residue |
B | CYS45 |
B | ILE46 |
B | ALA47 |
B | ASP48 |
B | GLY49 |
B | SER50 |
B | CYS51 |
B | CYS93 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SF4 B 105 |
Chain | Residue |
B | CYS55 |
B | VAL59 |
B | CYS83 |
B | CYS86 |
B | MET87 |
B | CYS89 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 106 |
Chain | Residue |
B | HIS16 |
B | HIS19 |
B | HIS34 |
B | ASP76 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE F3S C 104 |
Chain | Residue |
C | CYS45 |
C | ILE46 |
C | ASP48 |
C | GLY49 |
C | SER50 |
C | CYS51 |
C | ALA75 |
C | CYS93 |
site_id | AC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 C 105 |
Chain | Residue |
C | CYS55 |
C | VAL59 |
C | CYS83 |
C | ILE84 |
C | CYS86 |
C | MET87 |
C | CYS89 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN C 106 |
Chain | Residue |
C | HIS16 |
C | HIS19 |
C | HIS34 |
C | ASP76 |
site_id | BC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE F3S D 104 |
Chain | Residue |
D | CYS45 |
D | ILE46 |
D | ALA47 |
D | ASP48 |
D | GLY49 |
D | SER50 |
D | CYS51 |
D | ALA75 |
D | CYS93 |
site_id | BC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SF4 D 105 |
Chain | Residue |
D | CYS55 |
D | VAL57 |
D | PHE60 |
D | CYS83 |
D | ILE84 |
D | CYS86 |
D | MET87 |
D | CYS89 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN D 106 |
Chain | Residue |
D | HIS16 |
D | HIS19 |
D | HIS34 |
D | ASP76 |
site_id | BC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE F3S E 104 |
Chain | Residue |
E | CYS45 |
E | ILE46 |
E | ALA47 |
E | ASP48 |
E | GLY49 |
E | SER50 |
E | CYS51 |
E | CYS93 |
site_id | BC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 E 105 |
Chain | Residue |
E | CYS55 |
E | VAL59 |
E | CYS83 |
E | ILE84 |
E | CYS86 |
E | MET87 |
E | CYS89 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN E 106 |
Chain | Residue |
E | HIS16 |
E | HIS19 |
E | HIS34 |
E | ASP76 |
site_id | BC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE F3S F 104 |
Chain | Residue |
F | GLY49 |
F | CYS51 |
F | CYS93 |
F | CYS45 |
F | ILE46 |
F | ALA47 |
F | ASP48 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 F 105 |
Chain | Residue |
F | CYS55 |
F | VAL59 |
F | CYS83 |
F | ILE84 |
F | CYS86 |
F | MET87 |
F | CYS89 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN F 106 |
Chain | Residue |
F | HIS16 |
F | HIS19 |
F | HIS34 |
F | ASP76 |
site_id | CC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE F3S G 104 |
Chain | Residue |
G | CYS45 |
G | ILE46 |
G | ASP48 |
G | GLY49 |
G | SER50 |
G | CYS51 |
G | ALA75 |
G | CYS93 |
site_id | CC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 G 105 |
Chain | Residue |
G | CYS55 |
G | VAL59 |
G | CYS83 |
G | ILE84 |
G | CYS86 |
G | MET87 |
G | CYS89 |
site_id | CC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN G 106 |
Chain | Residue |
G | HIS16 |
G | HIS19 |
G | HIS34 |
G | ASP76 |
Functional Information from PROSITE/UniProt
site_id | PS00198 |
Number of Residues | 12 |
Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiFCMaCVnVCP |
Chain | Residue | Details |
A | CYS83-PRO94 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 84 |
Details | BINDING: BINDING => ECO:0000269|PubMed:18258200, ECO:0007744|PDB:2VKR |
Chain | Residue | Details |
F | CYS89 | |
F | CYS93 | |
G | HIS16 | |
G | HIS19 | |
G | HIS34 | |
G | CYS45 | |
G | ILE46 | |
G | CYS51 | |
G | CYS55 | |
G | ASP76 | |
G | CYS83 | |
G | CYS86 | |
G | CYS89 | |
G | CYS93 | |
A | ILE46 | |
A | CYS51 | |
A | CYS55 | |
A | ASP76 | |
A | CYS83 | |
A | CYS86 | |
A | CYS89 | |
A | CYS93 | |
B | HIS16 | |
B | HIS19 | |
B | HIS34 | |
B | CYS45 | |
B | ILE46 | |
B | CYS51 | |
B | CYS55 | |
B | ASP76 | |
B | CYS83 | |
B | CYS86 | |
B | CYS89 | |
B | CYS93 | |
C | HIS16 | |
C | HIS19 | |
C | HIS34 | |
C | CYS45 | |
C | ILE46 | |
C | CYS51 | |
C | CYS55 | |
C | ASP76 | |
C | CYS83 | |
C | CYS86 | |
C | CYS89 | |
C | CYS93 | |
D | HIS16 | |
D | HIS19 | |
D | HIS34 | |
D | CYS45 | |
D | ILE46 | |
D | CYS51 | |
D | CYS55 | |
D | ASP76 | |
D | CYS83 | |
D | CYS86 | |
D | CYS89 | |
D | CYS93 | |
E | HIS16 | |
E | HIS19 | |
E | HIS34 | |
E | CYS45 | |
E | ILE46 | |
E | CYS51 | |
E | CYS55 | |
E | ASP76 | |
E | CYS83 | |
E | CYS86 | |
E | CYS89 | |
E | CYS93 | |
F | HIS16 | |
F | HIS19 | |
F | HIS34 | |
F | CYS45 | |
F | ILE46 | |
F | CYS51 | |
F | CYS55 | |
F | ASP76 | |
F | CYS83 | |
F | CYS86 | |
A | HIS16 | |
A | HIS19 | |
A | HIS34 | |
A | CYS45 |
site_id | SWS_FT_FI2 |
Number of Residues | 14 |
Details | MOD_RES: N6-methyllysine; partial => ECO:0000269|Ref.1 |
Chain | Residue | Details |
A | LYS29 | |
A | LYS101 | |
B | LYS29 | |
B | LYS101 | |
C | LYS29 | |
C | LYS101 | |
D | LYS29 | |
D | LYS101 | |
E | LYS29 | |
E | LYS101 | |
F | LYS29 | |
F | LYS101 | |
G | LYS29 | |
G | LYS101 |