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2V9K

Crystal structure of human PUS10, a novel pseudouridine synthase.

Functional Information from GO Data
ChainGOidnamespacecontents
A0001522biological_processpseudouridine synthesis
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0008033biological_processtRNA processing
A0009451biological_processRNA modification
A0009982molecular_functionpseudouridine synthase activity
A0016853molecular_functionisomerase activity
A0031053biological_processprimary miRNA processing
A0031119biological_processtRNA pseudouridine synthesis
A0046872molecular_functionmetal ion binding
A0070878molecular_functionprimary miRNA binding
A0106029molecular_functiontRNA pseudouridine synthase activity
A0160148molecular_functiontRNA pseudouridine(55) synthase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A1529
ChainResidue
AARG447
AILE486
ALYS487
AEPE1534
AHOH2206

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A1530
ChainResidue
AGLY341
AARG354
AHOH2265

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A1531
ChainResidue
AHOH2091
AASN385

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A1532
ChainResidue
AVAL146
ALYS183
ALYS187

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A1533
ChainResidue
ACYS21
ACYS24
ACYS109
ACYS112

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EPE A1534
ChainResidue
AARG342
AGLU343
AASP344
AARG452
AARG457
AGLY483
ATHR484
ATYR485
ACL1529
AHOH2206
AHOH2316

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EPE A1535
ChainResidue
AASN254
ATRP419
AHIS473
ALEU512

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A1536
ChainResidue
ATHR18
AASN110
APRO268
APRO269
AASN270
AHOH2140

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:30530625, ECO:0000269|PubMed:31819270
ChainResidueDetails
AASP344

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:17900615, ECO:0007744|PDB:2V9K
ChainResidueDetails
ACYS21
ACYS24
ACYS109
ACYS112

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17525332
ChainResidueDetails
ASER79

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17525332, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER84

219515

PDB entries from 2024-05-08

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