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2V5J

Apo Class II aldolase HpcH

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0009056biological_processcatabolic process
A0010124biological_processphenylacetate catabolic process
A0016829molecular_functionlyase activity
A0016832molecular_functionaldehyde-lyase activity
A0018802molecular_function2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity
A0043863molecular_function4-hydroxy-2-ketopimelate aldolase activity
A0046872molecular_functionmetal ion binding
B0003824molecular_functioncatalytic activity
B0009056biological_processcatabolic process
B0010124biological_processphenylacetate catabolic process
B0016829molecular_functionlyase activity
B0016832molecular_functionaldehyde-lyase activity
B0018802molecular_function2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity
B0043863molecular_function4-hydroxy-2-ketopimelate aldolase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A1260
ChainResidue
ALYS6
ALYS10
AARG109
AGLU164
AGLY165
AASP167

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B1253
ChainResidue
BGLU164
BASP167
BHOH2141
BLYS6
BLYS10
BARG109

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A1261
ChainResidue
ASER24
ASER25
ATYR26
AHOH2031
AHOH2266
BSER23
BGLN51
BLEU54
BGOL1254

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B1254
ChainResidue
ASER23
AGLN51
ALEU54
AGOL1261
BSER24
BSER25
BTYR26
BHOH2035
BHOH2037

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A1262
ChainResidue
AALA0
AGLY86
AGLN88
AALA125
AARG127
AHOH2167
AHOH2267
AHOH2268

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B1255
ChainResidue
BALA0
BGLY86
BGLN88
BALA125
BARG127
BHOH2242

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A1263
ChainResidue
ALEU9
ALYS10
AARG203
AGLY206
AHOH2198
AHOH2269

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:17881002, ECO:0000269|PubMed:18775708
ChainResidueDetails
AHIS45
BHIS45

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305|PubMed:17881002
ChainResidueDetails
AGLN147
AALA174
AASP175
BGLN147
BALA174
BASP175

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:17881002
ChainResidueDetails
AGLU149
BGLU149

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000305|PubMed:17881002
ChainResidueDetails
AARG70
BARG70

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Increases basicity of active site His => ECO:0000305|PubMed:17881002
ChainResidueDetails
AASP84
BASP84

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dxe
ChainResidueDetails
AHIS45
AARG70

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dxe
ChainResidueDetails
BHIS45
BARG70

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PDB entries from 2024-07-31

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