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2V30

Human orotidine 5'-phosphate decarboxylase domain of uridine monophospate synthetase (UMPS) in complex with its product UMP.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE U5P A1480
ChainResidue
ASER257
AGLN430
ATYR432
AGLY450
AARG451
AHOH2048
AHOH2320
AHOH2321
BASP317
BILE318
BTHR321
AASP259
ALYS281
AHIS283
AASP312
ALYS314
AMET371
ASER372
APRO417

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE U5P B1479
ChainResidue
AASP317
AILE318
ATHR321
BSER257
BASP259
BLYS281
BHIS283
BASP312
BLYS314
BMET371
BSER372
BPRO417
BGLN430
BTYR432
BGLY450
BARG451
BHOH2026
BHOH2151
BHOH2252
BHOH2253

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IFeDrKfaDIGnTV
ChainResidueDetails
AILE309-VAL322

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: For OMPdecase activity => ECO:0000269|PubMed:18184586
ChainResidueDetails
AASP312
ALYS314
AASP317
BASP312
BLYS314
BASP317

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCD
ChainResidueDetails
ASER257
AASP317
ATHR321
BSER257
BASP317
BTHR321

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCD, ECO:0007744|PDB:2QCH
ChainResidueDetails
AASP259
ASER372
AGLN430
AGLY450
BASP259
BSER372
BGLN430
BGLY450

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCL
ChainResidueDetails
ALYS281
ALYS314
BLYS281
BLYS314

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PDB entries from 2024-04-24

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