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2V0R

crystal structure of a hairpin exchange variant (LTx) of the targeting LINE-1 retrotransposon endonuclease

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004518molecular_functionnuclease activity
A0006281biological_processDNA repair
B0003824molecular_functioncatalytic activity
B0004518molecular_functionnuclease activity
B0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A1241
ChainResidue
AASN16
AGLY17
ALEU18
AASN19
AHIS45

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A1242
ChainResidue
AHOH2023
AHIS45
ALYS71
AALA72
ATYR115

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A1243
ChainResidue
AGLU43
ATYR115
AASN118
AASP145
ATYR193
AHIS232
AHOH2078

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1244
ChainResidue
APRO149
AARG155
AHOH2045
AHOH2079

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B1240
ChainResidue
BHIS45
BLYS71
BALA72
BTYR115

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B1241
ChainResidue
BGLY17
BLEU18
BASN19
BHIS45
BHOH2076

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250|UniProtKB:P27695
ChainResidueDetails
ATYR115
BTYR115

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000250|UniProtKB:P27695
ChainResidueDetails
AASP145
BASP145

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:17626046, ECO:0000269|PubMed:34554261, ECO:0007744|PDB:2V0S, ECO:0007744|PDB:7N8K
ChainResidueDetails
AGLU43
BGLU43

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 1ako
ChainResidueDetails
AASP207
AASP145
AASN14
AASN147
AHIS232

site_idCSA2
Number of Residues5
DetailsAnnotated By Reference To The Literature 1ako
ChainResidueDetails
BASP207
BASP145
BASN14
BASN147
BHIS232

237423

PDB entries from 2025-06-11

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