Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0004789 | molecular_function | thiamine-phosphate diphosphorylase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0009228 | biological_process | thiamine biosynthetic process |
A | 0009229 | biological_process | thiamine diphosphate biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0004789 | molecular_function | thiamine-phosphate diphosphorylase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0009228 | biological_process | thiamine biosynthetic process |
B | 0009229 | biological_process | thiamine diphosphate biosynthetic process |
B | 0016740 | molecular_function | transferase activity |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 2005 |
Chain | Residue |
A | ASP93 |
A | ASP112 |
A | POP2003 |
A | HOH3020 |
A | HOH3051 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 2006 |
Chain | Residue |
B | ASP93 |
B | ASP112 |
B | POP2004 |
B | HOH3022 |
B | HOH3057 |
site_id | AC3 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE TPS A 2001 |
Chain | Residue |
A | TYR29 |
A | ILE31 |
A | GLN57 |
A | ARG59 |
A | ASN92 |
A | HIS107 |
A | SER130 |
A | THR156 |
A | THR158 |
A | ILE186 |
A | GLY188 |
A | MET207 |
A | ILE208 |
A | SER209 |
A | POP2003 |
A | HOH3001 |
A | HOH3002 |
A | HOH3063 |
A | HOH3144 |
site_id | AC4 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE TPS B 2002 |
Chain | Residue |
B | TYR29 |
B | ILE31 |
B | GLN57 |
B | ARG59 |
B | ASN92 |
B | HIS107 |
B | SER130 |
B | THR156 |
B | THR158 |
B | LYS159 |
B | ILE186 |
B | GLY188 |
B | MET207 |
B | ILE208 |
B | SER209 |
B | POP2004 |
B | HOH3003 |
B | HOH3013 |
B | HOH3169 |
site_id | AC5 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE POP A 2003 |
Chain | Residue |
A | ARG59 |
A | LYS61 |
A | ASN92 |
A | ASP93 |
A | GLY109 |
A | ASP112 |
A | SER130 |
A | LYS159 |
A | TPS2001 |
A | MG2005 |
A | HOH3020 |
A | HOH3027 |
A | HOH3051 |
A | HOH3062 |
A | HOH3098 |
A | HOH3108 |
site_id | AC6 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE POP B 2004 |
Chain | Residue |
B | LYS61 |
B | ASN92 |
B | ASP93 |
B | GLY109 |
B | ASP112 |
B | SER130 |
B | LYS159 |
B | TPS2002 |
B | MG2006 |
B | HOH3022 |
B | HOH3029 |
B | HOH3057 |
B | HOH3081 |
B | HOH3149 |
B | HOH3202 |
B | ARG59 |
site_id | MGA |
Number of Residues | 2 |
Details | MG BINDING SITE |
Chain | Residue |
A | ASP93 |
A | ASP112 |
site_id | MGB |
Number of Residues | 2 |
Details | MG BINDING SITE |
Chain | Residue |
B | ASP93 |
B | ASP112 |
site_id | PPA |
Number of Residues | 5 |
Details | PYROPHOSPHATE BINDING SITE |
Chain | Residue |
A | ARG59 |
A | LYS61 |
A | LYS159 |
A | SER130 |
A | ASN92 |
site_id | PPB |
Number of Residues | 5 |
Details | PYROPHOSPHATE BINDING SITE |
Chain | Residue |
B | ARG59 |
B | LYS61 |
B | LYS159 |
B | SER130 |
B | ASN92 |
site_id | TPA |
Number of Residues | 10 |
Details | THIAMIN PHOSPHATE BINDING SITE |
Chain | Residue |
A | TYR29 |
A | SER209 |
A | HIS107 |
A | TYR147 |
A | ILE186 |
A | ILE208 |
A | GLN57 |
A | THR156 |
A | THR158 |
A | GLY188 |
site_id | TPB |
Number of Residues | 10 |
Details | THIAMIN PHOSPHATE BINDING SITE |
Chain | Residue |
B | TYR29 |
B | HIS107 |
B | TYR147 |
B | ILE186 |
B | ILE208 |
B | GLN57 |
B | THR156 |
B | THR158 |
B | GLY188 |
B | SER209 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 18 |
Details | BINDING: |
Chain | Residue | Details |
A | GLN57 | |
B | GLN57 | |
B | ASN92 | |
B | ASP93 | |
B | ASP112 | |
B | SER130 | |
B | THR156 | |
B | LYS159 | |
B | GLY188 | |
B | ILE208 | |
A | ASN92 | |
A | ASP93 | |
A | ASP112 | |
A | SER130 | |
A | THR156 | |
A | LYS159 | |
A | GLY188 | |
A | ILE208 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 10350464, 11513589 |
Chain | Residue | Details |
A | ARG59 | |
A | SER130 | |
A | LYS159 | |
site_id | CSA2 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 10350464, 11513589 |
Chain | Residue | Details |
B | ARG59 | |
B | SER130 | |
B | LYS159 | |
site_id | MCSA1 |
Number of Residues | 3 |
Details | M-CSA 364 |
Chain | Residue | Details |
A | ARG59 | electrostatic stabiliser |
A | SER130 | electrostatic stabiliser, enhance reactivity |
A | LYS159 | electrostatic stabiliser |
site_id | MCSA2 |
Number of Residues | 3 |
Details | M-CSA 364 |
Chain | Residue | Details |
B | ARG59 | electrostatic stabiliser |
B | SER130 | electrostatic stabiliser, enhance reactivity |
B | LYS159 | electrostatic stabiliser |