Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2QYV

Crystal structure of putative Xaa-His dipeptidase (YP_718209.1) from Haemophilus somnus 129PT at 2.11 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0016787molecular_functionhydrolase activity
A0016805molecular_functiondipeptidase activity
A0046872molecular_functionmetal ion binding
A0070573molecular_functionmetallodipeptidase activity
B0005829cellular_componentcytosol
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0008237molecular_functionmetallopeptidase activity
B0016787molecular_functionhydrolase activity
B0016805molecular_functiondipeptidase activity
B0046872molecular_functionmetal ion binding
B0070573molecular_functionmetallodipeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 501
ChainResidue
AHIS76
AASP115
AASP169
AZN502

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 502
ChainResidue
AASP115
AGLU146
AHIS458
AZN501

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 503
ChainResidue
AASN258
AARG366
AALA431
AGLY432
AHIS458
AHIS214

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 504
ChainResidue
AGLN8
APRO9
ALYS10
AHOH598

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 505
ChainResidue
AASN67
AARG68
ASER485
AHOH726

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 506
ChainResidue
AGLY254
ASER255
AARG262
AGLU263
AHOH675

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 507
ChainResidue
AASN173
ATHR453
AHIS465

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 508
ChainResidue
ASER394
AGLY395
AHOH624
AHOH742

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 509
ChainResidue
AGLU200
AHIS201
ALYS305
ALYS308
AHOH679
AHOH715

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 510
ChainResidue
ALYS283
AHOH746
BASN130

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 501
ChainResidue
BHIS76
BASP115
BGLU145
BASP169
BZN502

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 502
ChainResidue
BASP115
BGLU146
BHIS458
BZN501

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 503
ChainResidue
BHIS214
BASN258
BARG366
BALA431
BGLY432
BHIS458
BHOH604

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 504
ChainResidue
BGLN8
BPRO9
BLYS10
BHOH626

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 505
ChainResidue
BASN67
BARG68
BSER485
BHOH610
BHOH653

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 506
ChainResidue
BGLY254
BSER255
BPRO261
BARG262
BGLU263

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 507
ChainResidue
BSER394
BGLY395
BHOH622
BHOH735

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 508
ChainResidue
BGLU200
BHIS201
BLYS305
BLYS308
BHOH700
BHOH717

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 509
ChainResidue
BASN173
BTHR453
BHIS465
BALA468

site_idCC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 510
ChainResidue
AASN130
BLYS283

site_idCC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 511
ChainResidue
AASN198
BASN357

site_idCC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 512
ChainResidue
AASP356
AASN357
BASN198

site_idCC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 511
ChainResidue
BSER371
BSER374
BTYR375
AARG232
AGLU236
AHOH524
AHOH572
AHOH759

site_idCC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 513
ChainResidue
ASER371
ASER374
ATYR375
BARG232
BGLU236
BPHE284
BHOH523
BHOH555
BHOH724

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 512
ChainResidue
AGLN238
AGLN316
ALYS319
BSER385

site_idCC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 514
ChainResidue
BLYS381
BILE391
BASN392
BLEU393

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 515
ChainResidue
BLEU11
BGLN14
BTRP15
BGLU128

site_idDC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 516
ChainResidue
AARG334
ATYR375
BVAL229
BARG232
BILE288
BLEU292
BHOH738

site_idDC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 517
ChainResidue
ATYR375
AGOL517
AHOH744
BLYS228
BASN326
BLEU328
BPRO329
BASN330
BHOH586

site_idDC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 513
ChainResidue
AGLN14
ATRP15
AGLU128

site_idDC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 514
ChainResidue
AGLU193
AASN320
AALA387
AGLN388
AHOH536
AHOH550
AHOH551

site_idDC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 515
ChainResidue
APHE46
AARG58
ALYS59
APRO60
AARG161
AHOH753
BLYS289

site_idDC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 518
ChainResidue
ALYS289
BGLY44
BPHE46
BARG58
BLYS59
BPRO60
BARG161

site_idDC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 519
ChainResidue
BARG147
BASN185
BARG257

site_idDC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 520
ChainResidue
AASP131
AALA133
AHOH729
BGLN278
BGLN282
BHOH601

site_idDC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 521
ChainResidue
BGLN238
BPHE246
BSER315
BTHR318
BLYS319

site_idEC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 516
ChainResidue
ASER385
AHOH626
BGLN238
BHOH719

site_idEC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL A 517
ChainResidue
ALYS228
AASN326
AVAL327
ALEU328
APRO329
AASN330
AHOH615
AHOH743
AHOH744
AHOH751
BTYR375
BGOL517

site_idEC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 518
ChainResidue
AARG232
AHOH594
AHOH634
BTYR375

site_idEC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IPA A 519
ChainResidue
AGLN282
AHOH580
BALA133

site_idEC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IPA A 520
ChainResidue
AGLU307
ALYS308
AHOH755

site_idEC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IPA B 522
ChainResidue
BGLU307
BLYS308
BHOH704

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon