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2QUV

Phosphate ions in fructose-1,6-bisphosphate aldolase from rabbit muscle

Functional Information from GO Data
ChainGOidnamespacecontents
A0004332molecular_functionfructose-bisphosphate aldolase activity
A0005515molecular_functionprotein binding
A0006096biological_processglycolytic process
A0016829molecular_functionlyase activity
A0030335biological_processpositive regulation of cell migration
A0031430cellular_componentM band
A0031674cellular_componentI band
A0034316biological_processnegative regulation of Arp2/3 complex-mediated actin nucleation
A0051289biological_processprotein homotetramerization
B0004332molecular_functionfructose-bisphosphate aldolase activity
B0005515molecular_functionprotein binding
B0006096biological_processglycolytic process
B0016829molecular_functionlyase activity
B0030335biological_processpositive regulation of cell migration
B0031430cellular_componentM band
B0031674cellular_componentI band
B0034316biological_processnegative regulation of Arp2/3 complex-mediated actin nucleation
B0051289biological_processprotein homotetramerization
C0004332molecular_functionfructose-bisphosphate aldolase activity
C0005515molecular_functionprotein binding
C0006096biological_processglycolytic process
C0016829molecular_functionlyase activity
C0030335biological_processpositive regulation of cell migration
C0031430cellular_componentM band
C0031674cellular_componentI band
C0034316biological_processnegative regulation of Arp2/3 complex-mediated actin nucleation
C0051289biological_processprotein homotetramerization
D0004332molecular_functionfructose-bisphosphate aldolase activity
D0005515molecular_functionprotein binding
D0006096biological_processglycolytic process
D0016829molecular_functionlyase activity
D0030335biological_processpositive regulation of cell migration
D0031430cellular_componentM band
D0031674cellular_componentI band
D0034316biological_processnegative regulation of Arp2/3 complex-mediated actin nucleation
D0051289biological_processprotein homotetramerization
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 A 3001
ChainResidue
ASER271
AHOH3317
AHOH3507
AGLY272
AGLY273
AGLY302
AARG303
AHOH3005
AHOH3068
AHOH3150
AHOH3315

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 B 3002
ChainResidue
BLEU270
BSER271
BGLY272
BSER300
BGLY302
BHOH3319
BHOH3448

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 3003
ChainResidue
BSER271
BGLY273
BGLY302
BARG303
BHOH3012
BHOH3013
BHOH3014
BHOH3028
BHOH3307

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 B 3007
ChainResidue
BGLN202
BTHR254
BARG258
BHOH3034
BHOH3283
CLYS12
CHOH3059

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 C 3004
ChainResidue
CSER271
CGLY302
CARG303
CHOH3146
CHOH3357
CHOH3380
CHOH3445
CHOH3454
CHOH3524
CHOH3551

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 D 3005
ChainResidue
DSER271
DGLY272
DGLY302
DARG303
DHOH3047
DHOH3145
DHOH3337
DHOH3510

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 D 3006
ChainResidue
ALYS12
DGLN202
DTHR254
DARG258
DHOH3057
DHOH3474

Functional Information from PROSITE/UniProt
site_idPS00158
Number of Residues11
DetailsALDOLASE_CLASS_I Fructose-bisphosphate aldolase class-I active site. IyLEGtLLKPN
ChainResidueDetails
AILE221-ASN231

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"11779856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Schiff-base intermediate with dihydroxyacetone-P","evidences":[{"source":"PubMed","id":"11779856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues20
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10504235","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6ALD","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsSite: {"description":"Essential for substrate cleavage"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsSite: {"description":"Alkylation inactivates the enzyme"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsSite: {"description":"Alkylation inactivates the enzyme; essential for the subsequent hydrolysis of the dihydroxyacetone Schiff base"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsSite: {"description":"Necessary for preference for fructose 1,6-bisphosphate over fructose 1-phosphate"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues4
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues16
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues4
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues8
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues8
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues4
DetailsModified residue: {"description":"N6-malonyllysine; alternate","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P05065","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues4
DetailsModified residue: {"description":"N6-malonyllysine","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues4
DetailsModified residue: {"description":"Deamidated asparagine; in form beta","evidences":[{"source":"PubMed","id":"4857186","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI17
Number of Residues8
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P04075","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ald
ChainResidueDetails
AGLU187
ALYS229
AASP33

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ald
ChainResidueDetails
BGLU187
BLYS229
BASP33

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ald
ChainResidueDetails
CGLU187
CLYS229
CASP33

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ald
ChainResidueDetails
DGLU187
DLYS229
DASP33

site_idMCSA1
Number of Residues7
DetailsM-CSA 222
ChainResidueDetails
AASP33electrostatic stabiliser, hydrogen bond acceptor
ALYS146electrostatic stabiliser, hydrogen bond donor
AGLU187electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, polar interaction, proton acceptor, proton donor, proton relay
AGLU189activator, electrostatic stabiliser, hydrogen bond acceptor, polar interaction
ALYS229covalently attached, electron pair acceptor, electron pair donor, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, polar interaction, proton acceptor, proton donor, proton relay
ASER300electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
ATYR363hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues7
DetailsM-CSA 222
ChainResidueDetails
BASP33electrostatic stabiliser, hydrogen bond acceptor
BLYS146electrostatic stabiliser, hydrogen bond donor
BGLU187electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, polar interaction, proton acceptor, proton donor, proton relay
BGLU189activator, electrostatic stabiliser, hydrogen bond acceptor, polar interaction
BLYS229covalently attached, electron pair acceptor, electron pair donor, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, polar interaction, proton acceptor, proton donor, proton relay
BSER300electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
BTYR363hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA3
Number of Residues7
DetailsM-CSA 222
ChainResidueDetails
CASP33electrostatic stabiliser, hydrogen bond acceptor
CLYS146electrostatic stabiliser, hydrogen bond donor
CGLU187electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, polar interaction, proton acceptor, proton donor, proton relay
CGLU189activator, electrostatic stabiliser, hydrogen bond acceptor, polar interaction
CLYS229covalently attached, electron pair acceptor, electron pair donor, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, polar interaction, proton acceptor, proton donor, proton relay
CSER300electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
CTYR363hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA4
Number of Residues7
DetailsM-CSA 222
ChainResidueDetails
DASP33electrostatic stabiliser, hydrogen bond acceptor
DLYS146electrostatic stabiliser, hydrogen bond donor
DGLU187electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, polar interaction, proton acceptor, proton donor, proton relay
DGLU189activator, electrostatic stabiliser, hydrogen bond acceptor, polar interaction
DLYS229covalently attached, electron pair acceptor, electron pair donor, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, polar interaction, proton acceptor, proton donor, proton relay
DSER300electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
DTYR363hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

246905

PDB entries from 2025-12-31

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