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2QD8

HIV-1 Protease Mutant I84V with potent Antiviral inhibitor GRL-98065

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA A 500
ChainResidue
AARG41
AASP60
AHOH511
AHOH513
AHOH529
AHOH530
AHOH550

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 502
ChainResidue
AHOH599
BARG141
ATHR74
AASN88

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT B 802
ChainResidue
BPRO139
BGLY140
BARG141
BTYR159
BASP160
BHOH851
BHOH861

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT B 803
ChainResidue
BTHR191
BHOH823

site_idAC5
Number of Residues27
DetailsBINDING SITE FOR RESIDUE 065 B 404
ChainResidue
ALEU23
AASP25
AGLY27
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
APRO81
BARG108
BASP125
BGLY127
BALA128
BASP129
BASP130
BILE147
BGLY148
BGLY149
BILE150
BPRO181
BHOH807
BHOH819
BHOH903
BHOH916
BHOH918
BHOH924

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BTHR126
BASP125

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP125

246333

PDB entries from 2025-12-17

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