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2Q1U

Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NAD+ and UDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0006541biological_processglutamine metabolic process
A0016740molecular_functiontransferase activity
B0000166molecular_functionnucleotide binding
B0006541biological_processglutamine metabolic process
B0016740molecular_functiontransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NAD A 601
ChainResidue
AGLY19
AALA49
ASER66
AILE67
ALEU86
AALA87
ATHR88
AHIS90
AASN105
ATHR109
ASER129
AGLY22
AALA130
ATYR161
ALYS165
APHE188
AGLN189
AASN190
AVAL191
AARG212
AGOL801
AHOH803
APHE23
AHOH805
AHOH823
AHOH827
AHOH828
AHOH829
AVAL24
AASP44
AASN45
ALEU46
ALEU47
ASER48

site_idAC2
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NAD B 602
ChainResidue
BGLY19
BGLY22
BPHE23
BVAL24
BASP44
BASN45
BLEU46
BLEU47
BSER48
BALA49
BSER66
BILE67
BLEU86
BALA87
BTHR88
BHIS90
BASN105
BTHR109
BSER129
BALA130
BTYR161
BLYS165
BPHE188
BGLN189
BASN190
BVAL191
BARG212
BGOL802
BHOH808
BHOH809
BHOH821
BHOH854
BHOH855
BHOH891

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE UDP A 701
ChainResidue
AVAL214
APHE218
APRO229
AGLU231
AALA236
AHOH872
AHOH994
AHOH1048

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE UDP B 702
ChainResidue
BVAL214
BPHE218
BPRO229
BGLU231
BALA236
BARG238
BHOH859
BHOH965
BHOH1010

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 801
ChainResidue
AHIS90
AGLY91
AASN92
ATYR161
AASN213
ANAD601
AHOH856
AHOH902
AHOH1040

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 802
ChainResidue
BNAD602
BHOH889
BHOH890
BHOH1008
BHIS90
BGLY91
BASN92
BTYR161
BASN213

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ybv
ChainResidueDetails
AASN106
ATYR161
ASER129
ALYS165

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ybv
ChainResidueDetails
BASN106
BTYR161
BSER129
BLYS165

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PDB entries from 2024-10-09

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