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2PY7

Crystal structure of E. coli phosphoenolpyruvate carboxykinase mutant Lys213Ser complexed with ATP-Mg2+-Mn2+

Functional Information from GO Data
ChainGOidnamespacecontents
X0000166molecular_functionnucleotide binding
X0000287molecular_functionmagnesium ion binding
X0003824molecular_functioncatalytic activity
X0004611molecular_functionphosphoenolpyruvate carboxykinase activity
X0004612molecular_functionphosphoenolpyruvate carboxykinase (ATP) activity
X0005509molecular_functioncalcium ion binding
X0005524molecular_functionATP binding
X0005737cellular_componentcytoplasm
X0005829cellular_componentcytosol
X0006094biological_processgluconeogenesis
X0016829molecular_functionlyase activity
X0016831molecular_functioncarboxy-lyase activity
X0017076molecular_functionpurine nucleotide binding
X0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG X 998
ChainResidue
XTHR255
XHOH1012
XHOH1022
XHOH1040

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MN X 999
ChainResidue
XHIS232
XASP269
XHOH1373

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN X 1001
ChainResidue
XHIS104
XHOH1488
XASP19
XHIS21

site_idAC4
Number of Residues28
DetailsBINDING SITE FOR RESIDUE ATP X 541
ChainResidue
XHIS232
XLEU249
XSER250
XGLY251
XTHR252
XGLY253
XLYS254
XTHR255
XTHR256
XASP269
XLYS288
XGLU297
XARG333
XTHR441
XARG449
XILE450
XSER451
XILE452
XTHR455
XHOH1012
XHOH1022
XHOH1040
XHOH1100
XHOH1130
XHOH1230
XHOH1327
XHOH1375
XHOH1384

Functional Information from PROSITE/UniProt
site_idPS00532
Number of Residues16
DetailsPEPCK_ATP Phosphoenolpyruvate carboxykinase (ATP) signature. LIGDDEHgWdDdGVfN
ChainResidueDetails
XLEU265-ASN280

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00453, ECO:0000269|PubMed:11724534
ChainResidueDetails
XARG65
XTYR207
XSER213
XARG333

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
XLYS149
XASN150
XPHE152
XGLY283

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00453, ECO:0000269|Ref.21
ChainResidueDetails
XHIS232
XASP269

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00453, ECO:0000269|PubMed:12837799, ECO:0000269|PubMed:17475535, ECO:0000269|PubMed:8599762, ECO:0000269|PubMed:9406547, ECO:0000269|Ref.20, ECO:0000269|Ref.21
ChainResidueDetails
XGLY248
XGLU297
XARG449
XTHR455

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000255|HAMAP-Rule:MF_00453, ECO:0000269|PubMed:18723842
ChainResidueDetails
XLYS87
XLYS523

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1aq2
ChainResidueDetails
XLYS254
XARG333
XHIS232

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1aq2
ChainResidueDetails
XARG333
XHIS232

site_idMCSA1
Number of Residues8
DetailsM-CSA 51
ChainResidueDetails

237735

PDB entries from 2025-06-18

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