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2PVZ

Crystal structure of methylaconitate isomerase PrpF from Shewanella oneidensis

Functional Information from GO Data
ChainGOidnamespacecontents
A0016853molecular_functionisomerase activity
A0016863molecular_functionintramolecular oxidoreductase activity, transposing C=C bonds
A0019629biological_processpropionate catabolic process, 2-methylcitrate cycle
B0016853molecular_functionisomerase activity
B0016863molecular_functionintramolecular oxidoreductase activity, transposing C=C bonds
B0019629biological_processpropionate catabolic process, 2-methylcitrate cycle
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA A 1001
ChainResidue
AGLN240
BLYS59

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA A 1002
ChainResidue
ALYS59
BGLN240

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 1003
ChainResidue
ASER69
ALYS73
ASER312
AHIS317

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 1004
ChainResidue
AGLN30
AHOH1186
AHOH1364
ALEU29

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1005
ChainResidue
ASER22
ACSD107
AGLY108
AASN109
AMET321
AGLY322
ATHR323

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1007
ChainResidue
AALA13
AALA14
ATHR15
APHE117
AASN121
AHOH1081
AHOH1090
AHOH1360

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1010
ChainResidue
APRO184
AASN219
AGLY221
AHOH1085

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EDO A 1011
ChainResidue
ALEU250
APHE253
AGLU254
AARG257
AILE282
ALEU311
AMET313
AGLY314
AHOH1111
AHOH1113
AHOH1123

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"PubMed","id":"17567742","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17567742","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Cysteine sulfinic acid (-SO2H)","evidences":[{"source":"PubMed","id":"17567742","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

244349

PDB entries from 2025-11-05

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