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2PPA

Anaerobically manipulated wild type oxidized AfNiR bound to nitrous oxide

Functional Information from GO Data
ChainGOidnamespacecontents
A0005507molecular_functioncopper ion binding
A0016491molecular_functionoxidoreductase activity
A0019333biological_processdenitrification pathway
A0042128biological_processnitrate assimilation
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
A0050421molecular_functionnitrite reductase (NO-forming) activity
B0005507molecular_functioncopper ion binding
B0016491molecular_functionoxidoreductase activity
B0019333biological_processdenitrification pathway
B0042128biological_processnitrate assimilation
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
B0050421molecular_functionnitrite reductase (NO-forming) activity
C0005507molecular_functioncopper ion binding
C0016491molecular_functionoxidoreductase activity
C0019333biological_processdenitrification pathway
C0042128biological_processnitrate assimilation
C0042597cellular_componentperiplasmic space
C0046872molecular_functionmetal ion binding
C0050421molecular_functionnitrite reductase (NO-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU1 A 501
ChainResidue
AHIS95
ACYS136
AHIS145
AMET150

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CU A 502
ChainResidue
AHIS100
AHIS135
BHIS306

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU1 B 501
ChainResidue
BHIS145
BMET150
BHIS95
BCYS136

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CU B 502
ChainResidue
BHIS100
BHIS135
CHIS306

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU1 C 501
ChainResidue
CHIS95
CCYS136
CHIS145
CMET150

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CU C 502
ChainResidue
AHIS306
CHIS100
CHIS135

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT C 503
ChainResidue
AILE257
AHIS306
ALEU308
CASP98
CHIS100
CHIS135
CALA137
CHOH1593

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT C 1502
ChainResidue
AALA302
CHOH1597

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT B 1503
ChainResidue
BGLY229
BILE300
BHIS319
BHOH1722

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT B 1504
ChainResidue
AGLU113
AHOH1549
BASP173
BGLY238
BGLU239
BLYS240
BHOH1553

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 1505
ChainResidue
BGLY140
BMET141
BPRO143
BTRP144
CGLU313

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT C 1506
ChainResidue
AHOH1635
BPHE282
CPHE282
CHOH1623
CHOH1643
CHOH1665
CHOH1728

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT C 1507
ChainResidue
CHIS60
CTYR184
CTHR206
CHOH1547
CHOH1601

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT C 1508
ChainResidue
AGLU313
CGLY140
CMET141
CPRO143
CTRP144
CMET210

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT C 1509
ChainResidue
CGLY229
CILE300
CHIS319
CLYS321

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT A 1510
ChainResidue
AGLY140
AMET141
APRO143
ATRP144
ATYR203
AMET210
BGLU313
BGLU325

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE N2O A 503
ChainResidue
AHIS100
AHIS135
AHOH1601
BILE257
BHIS306
BLEU308

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE N2O B 503
ChainResidue
BHIS100
BHIS135
BHOH1556
CILE257
CHIS306
CLEU308

site_idCC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE TRS A 1501
ChainResidue
CLEU213
CTHR214
ATHR212
ALEU213
ATHR214
AHOH1687
AHOH1704
AHOH1708
BTHR212
BLEU213
BTHR214
CTHR212

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: type 1 copper site => ECO:0000269|PubMed:8172899
ChainResidueDetails
AHIS95
BHIS95
CHIS95

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: type 2 copper site
ChainResidueDetails
AHIS100
AHIS135
BHIS100
BHIS135
CHIS100
CHIS135

site_idSWS_FT_FI3
Number of Residues9
DetailsBINDING: type 1 copper site
ChainResidueDetails
ACYS136
AHIS145
AMET150
BCYS136
BHIS145
BMET150
CCYS136
CHIS145
CMET150

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: type 2 copper site => ECO:0000269|PubMed:8172899
ChainResidueDetails
AHIS306
BHIS306
CHIS306

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
AASP98
AHIS255

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
BASP98
BHIS255

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
CASP98
CHIS255

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PDB entries from 2024-07-17

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