2PMB
Crystal structure of predicted nucleotide-binding protein from Vibrio cholerae
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005829 | cellular_component | cytosol |
| A | 0008714 | molecular_function | AMP nucleosidase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0047405 | molecular_function | pyrimidine-5'-nucleotide nucleosidase activity |
| B | 0005829 | cellular_component | cytosol |
| B | 0008714 | molecular_function | AMP nucleosidase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0047405 | molecular_function | pyrimidine-5'-nucleotide nucleosidase activity |
| C | 0005829 | cellular_component | cytosol |
| C | 0008714 | molecular_function | AMP nucleosidase activity |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0047405 | molecular_function | pyrimidine-5'-nucleotide nucleosidase activity |
| D | 0005829 | cellular_component | cytosol |
| D | 0008714 | molecular_function | AMP nucleosidase activity |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0047405 | molecular_function | pyrimidine-5'-nucleotide nucleosidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE PO4 D 601 |
| Chain | Residue |
| D | GLY158 |
| D | HOH720 |
| D | HIS159 |
| D | GLY260 |
| D | PRO261 |
| D | GLY262 |
| D | THR263 |
| D | HOH611 |
| D | HOH688 |
| D | HOH719 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PO4 D 602 |
| Chain | Residue |
| B | LYS205 |
| D | GLU193 |
| D | LYS197 |
| D | ASN228 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PO4 B 603 |
| Chain | Residue |
| B | GLY158 |
| B | HIS159 |
| B | GLY260 |
| B | PRO261 |
| B | GLY262 |
| B | THR263 |
| B | HOH707 |
| B | HOH844 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PO4 A 604 |
| Chain | Residue |
| A | GLY158 |
| A | HIS159 |
| A | GLY260 |
| A | PRO261 |
| A | GLY262 |
| A | THR263 |
| A | HOH679 |
| A | HOH735 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PO4 C 605 |
| Chain | Residue |
| C | GLY158 |
| C | HIS159 |
| C | GLY260 |
| C | PRO261 |
| C | GLY262 |
| C | THR263 |
| C | HOH715 |
| C | HOH799 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 D 606 |
| Chain | Residue |
| A | GLU74 |
| A | ARG75 |
| D | ARG339 |
| D | LYS343 |
| D | TYR349 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 B 607 |
| Chain | Residue |
| B | PRO285 |
| B | ILE286 |
| B | HIS316 |
| B | TYR317 |
| B | SER318 |
| B | HOH841 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PO4 C 608 |
| Chain | Residue |
| A | LYS205 |
| C | GLU193 |
| C | LYS197 |
| C | ASN228 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 B 609 |
| Chain | Residue |
| B | ARG339 |
| B | LYS343 |
| B | TYR349 |
| C | GLU74 |
| C | ARG75 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 A 610 |
| Chain | Residue |
| A | ARG339 |
| A | LYS343 |
| A | TYR349 |
| C | HOH771 |
| D | ARG75 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PO4 C 611 |
| Chain | Residue |
| B | ARG75 |
| C | ARG339 |
| C | LYS343 |
| C | TYR349 |
| site_id | BC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PO4 B 612 |
| Chain | Residue |
| B | GLU193 |
| B | LYS197 |
| B | ASN228 |
| D | LYS205 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 701 |
| Chain | Residue |
| C | ALA127 |
| C | THR131 |
| C | ARG249 |
| C | LEU355 |
| C | LYS356 |
| C | ILE357 |
| site_id | BC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 702 |
| Chain | Residue |
| B | MSE16 |
| B | ASP17 |
| B | ARG107 |
| B | TYR111 |
| B | ASN140 |
| C | ARG139 |
