Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006281 | biological_process | DNA repair |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0034061 | molecular_function | DNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 950 |
Chain | Residue |
A | ASP427 |
A | ASP429 |
A | NA951 |
A | DUP952 |
A | HOH1052 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE NA A 951 |
Chain | Residue |
A | DUP952 |
A | HOH1045 |
P | DC6 |
A | ASP427 |
A | ASP429 |
A | ASP490 |
A | MG950 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA A 600 |
Chain | Residue |
A | SER463 |
A | HOH1003 |
A | HOH1007 |
A | HOH1050 |
T | HOH42 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 602 |
Chain | Residue |
A | SER339 |
A | ILE341 |
A | ALA344 |
A | HOH1063 |
P | DA5 |
P | HOH616 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 603 |
Chain | Residue |
A | CYS300 |
A | SER301 |
A | ILE302 |
A | PRO303 |
A | HOH1089 |
D | DC3 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA P 604 |
Chain | Residue |
A | HOH1063 |
A | HOH1114 |
P | DA5 |
site_id | AC7 |
Number of Residues | 27 |
Details | BINDING SITE FOR RESIDUE DUP A 952 |
Chain | Residue |
A | ARG386 |
A | GLY416 |
A | SER417 |
A | ARG420 |
A | GLY426 |
A | ASP427 |
A | ASP429 |
A | TYR505 |
A | PHE506 |
A | THR507 |
A | GLY508 |
A | ASN513 |
A | MG950 |
A | NA951 |
A | HOH953 |
A | HOH961 |
A | HOH963 |
A | HOH1006 |
A | HOH1014 |
A | HOH1040 |
A | HOH1045 |
A | HOH1052 |
A | HOH1084 |
A | HOH1149 |
A | HOH1150 |
P | DC6 |
T | DA5 |
Functional Information from PROSITE/UniProt
site_id | PS00522 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_X DNA polymerase family X signature. GSYrRGkatCgDVDVLIthP |
Chain | Residue | Details |
A | GLY416-PRO435 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 56 |
Details | Region: {"description":"DNA-binding","evidences":[{"source":"PubMed","id":"14992725","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI2 |
Number of Residues | 9 |
Details | Region: {"description":"Involved in primer binding","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | Active site: {"description":"Schiff-base intermediate with DNA","evidences":[{"source":"PubMed","id":"11457865","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"17475573","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PFP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2PFQ","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI5 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"17475573","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PFO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2PFQ","evidenceCode":"ECO:0007744"}]} |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1jms |
Chain | Residue | Details |
A | ASP490 | |