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2P1R

Crystal structure of Salmonella typhimurium YegS, a putative lipid kinase homologous to eukaryotic sphingosine and diacylglycerol kinases.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0001727molecular_functionlipid kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0008654biological_processphospholipid biosynthetic process
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0001727molecular_functionlipid kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0008654biological_processphospholipid biosynthetic process
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0001727molecular_functionlipid kinase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0008654biological_processphospholipid biosynthetic process
C0016301molecular_functionkinase activity
C0016310biological_processphosphorylation
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0001727molecular_functionlipid kinase activity
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0008654biological_processphospholipid biosynthetic process
D0016301molecular_functionkinase activity
D0016310biological_processphosphorylation
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 300
ChainResidue
AASP67
AILE70
AASN97
APHE99
AALA100
AHOH305

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 301
ChainResidue
AASP218
ALEU220
AASP125
AASN200
ALEU215

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 302
ChainResidue
ASER242
AASP243
AASN245
AILE248

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 300
ChainResidue
BASP67
BILE70
BASN97
BPHE99
BALA100
BHOH339

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA B 301
ChainResidue
BASP125
BASN200
BLEU215
BASP218
BLEU220

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 302
ChainResidue
BSER242
BASP243
BASN245
BILE248

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA C 300
ChainResidue
CASP125
CASN200
CLEU215
CASP218
CLEU220

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA C 301
ChainResidue
CSER242
CASP243
CASN245
CILE248

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA C 302
ChainResidue
BGLY94
CARG81
CGLY83
CHOH400

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 303
ChainResidue
CASN12
CGLY66
CTHR69
CHOH351

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA D 300
ChainResidue
DASP125
DASN200
DLEU215
DASP218
DLEU220

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA D 301
ChainResidue
DSER242
DASP243
DASN245
DILE248

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA D 302
ChainResidue
AGLY94
DARG81
DGLY83
DHOH382

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 303
ChainResidue
DGLY66
DTHR69
DHOH322

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AGLU271
BGLU271
CGLU271
DGLU271

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATHR40
DTHR40
DGLY66
DTHR95
AGLY66
ATHR95
BTHR40
BGLY66
BTHR95
CTHR40
CGLY66
CTHR95

site_idSWS_FT_FI3
Number of Residues36
DetailsBINDING:
ChainResidueDetails
AASP125
BASP125
BASN200
BLEU215
BASP218
BLEU220
BSER242
BASP243
BASN245
BILE248
CASP125
AASN200
CASN200
CLEU215
CASP218
CLEU220
CSER242
CASP243
CASN245
CILE248
DASP125
DASN200
ALEU215
DLEU215
DASP218
DLEU220
DSER242
DASP243
DASN245
DILE248
AASP218
ALEU220
ASER242
AASP243
AASN245
AILE248

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PDB entries from 2024-09-11

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