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2OKL

Crystal structure of Peptide Deformylase 2 with actinonin from Bacillus cereus

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0043686biological_processco-translational protein modification
A0046872molecular_functionmetal ion binding
B0006412biological_processtranslation
B0016787molecular_functionhydrolase activity
B0042586molecular_functionpeptide deformylase activity
B0043686biological_processco-translational protein modification
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 601
ChainResidue
AGLN65
ACYS110
AHIS153
AHIS157
ABB2401

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 602
ChainResidue
BBB2403
BGLN65
BCYS110
BHIS153
BHIS157

site_idAC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE BB2 A 401
ChainResidue
AARG56
APRO57
AGLY58
AILE59
AGLY60
AGLN65
ALEU104
AGLY107
AGLU108
AGLY109
ACYS110
ALEU111
AILE149
AHIS153
AGLU154
AHIS157
AZN601
AHOH632
BBB2402
BHOH754

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE BB2 B 402
ChainResidue
AGLN45
APRO57
ABB2401
ABB2404
AHOH683
BGLN105
BLEU182
BARG184
BHOH610
BHOH611
BHOH629
BHOH646
BHOH654
BHOH688

site_idAC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE BB2 B 403
ChainResidue
ABB2404
AHOH724
BARG56
BPRO57
BGLY58
BILE59
BGLY60
BGLN65
BLEU104
BGLY107
BGLU108
BGLY109
BCYS110
BLEU111
BHIS153
BGLU154
BHIS157
BZN602
BHOH654

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE BB2 A 404
ChainResidue
AGLN105
ALEU182
AARG184
AHOH627
AHOH632
AHOH633
AHOH642
AHOH690
AHOH745
BGLN45
BPRO57
BBB2402
BBB2403

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CIT A 501
ChainResidue
ATHR128
AARG142
AHOH630
AHOH665
BILE95
BTHR128
BLYS140
BARG142

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AGLU154
BGLU154

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
ACYS110
AHIS153
AHIS157
BCYS110
BHIS153
BHIS157

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PDB entries from 2024-05-15

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