Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2O6H

Lumazine synthase RibH1 from Brucella melitensis (Gene BMEI1187, Swiss-Prot entry Q8YGH2) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione

Functional Information from GO Data
ChainGOidnamespacecontents
A0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
A0005829cellular_componentcytosol
A0009231biological_processriboflavin biosynthetic process
A0009349cellular_componentriboflavin synthase complex
A0016740molecular_functiontransferase activity
B0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
B0005829cellular_componentcytosol
B0009231biological_processriboflavin biosynthetic process
B0009349cellular_componentriboflavin synthase complex
B0016740molecular_functiontransferase activity
C0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
C0005829cellular_componentcytosol
C0009231biological_processriboflavin biosynthetic process
C0009349cellular_componentriboflavin synthase complex
C0016740molecular_functiontransferase activity
D0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
D0005829cellular_componentcytosol
D0009231biological_processriboflavin biosynthetic process
D0009349cellular_componentriboflavin synthase complex
D0016740molecular_functiontransferase activity
E0000906molecular_function6,7-dimethyl-8-ribityllumazine synthase activity
E0005829cellular_componentcytosol
E0009231biological_processriboflavin biosynthetic process
E0009349cellular_componentriboflavin synthase complex
E0016740molecular_functiontransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 301
ChainResidue
AALA67
AGLU73
EALA67
EGLU73

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CA A 302
ChainResidue
AGLU124

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 303
ChainResidue
BALA67
BGLU73
DALA67
DGLU73

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA C 304
ChainResidue
CALA67
CGLU73
CGLU73

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA C 305
ChainResidue
AHOH404
CGLU124

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA D 306
ChainResidue
DASP24
DASP25
DASP28
DHOH484

site_idAC7
Number of Residues13
DetailsBINDING SITE FOR RESIDUE INI A 201
ChainResidue
APHE22
ATYR23
AGLY52
AALA53
ALEU54
AGLU55
ATHR82
AVAL83
AHIS90
AVAL94
AHOH403
EASN115
EPHE140

site_idAC8
Number of Residues14
DetailsBINDING SITE FOR RESIDUE INI B 202
ChainResidue
AASN115
APHE140
BPHE22
BTYR23
BGLY52
BALA53
BLEU54
BGLU55
BTHR82
BVAL83
BILE84
BHIS90
BVAL94
BHOH422

site_idAC9
Number of Residues16
DetailsBINDING SITE FOR RESIDUE INI C 203
ChainResidue
BGLY114
BASN115
BPHE140
BALA144
CPHE22
CTYR23
CGLY52
CALA53
CLEU54
CGLU55
CTHR82
CVAL83
CILE84
CHIS90
CVAL94
CHOH438

site_idBC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE INI D 204
ChainResidue
CASN115
CPHE140
DPHE22
DTYR23
DGLY52
DALA53
DLEU54
DGLU55
DTHR82
DVAL83
DILE84
DHIS90
DVAL94

site_idBC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE INI E 205
ChainResidue
DASN115
DPHE140
EPHE22
ETYR23
EGLY52
EALA53
ELEU54
EGLU55
ETHR82
EVAL83
EILE84
EHIS90
EVAL94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsACT_SITE: Proton donor => ECO:0000255
ChainResidueDetails
AHIS90
BHIS90
CHIS90
DHIS90
EHIS90

site_idSWS_FT_FI2
Number of Residues20
DetailsBINDING:
ChainResidueDetails
APHE22
CALA53
CTHR82
CASN115
DPHE22
DALA53
DTHR82
DASN115
EPHE22
EALA53
ETHR82
AALA53
EASN115
ATHR82
AASN115
BPHE22
BALA53
BTHR82
BASN115
CPHE22

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU87
EARG129
AARG129
BGLU87
BARG129
CGLU87
CARG129
DGLU87
DARG129
EGLU87

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1rvv
ChainResidueDetails
AHIS90

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1rvv
ChainResidueDetails
BHIS90

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1rvv
ChainResidueDetails
CHIS90

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1rvv
ChainResidueDetails
DHIS90

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1rvv
ChainResidueDetails
EHIS90

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon