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2O05

Human spermidine synthase

Replaces:  1ZDZ
Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004766molecular_functionspermidine synthase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006595biological_processpolyamine metabolic process
A0008295biological_processspermidine biosynthetic process
A0016740molecular_functiontransferase activity
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A1990830biological_processcellular response to leukemia inhibitory factor
B0003824molecular_functioncatalytic activity
B0004766molecular_functionspermidine synthase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006595biological_processpolyamine metabolic process
B0008295biological_processspermidine biosynthetic process
B0016740molecular_functiontransferase activity
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B1990830biological_processcellular response to leukemia inhibitory factor
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE MTA A 501
ChainResidue
AGLN49
AGLY154
AASP155
AGLY156
AASP173
ASER174
ASER175
APRO180
AALA181
ASER183
AGLY101
AGLY102
AGLY103
AASP104
ACYS123
AGLU124
AILE125
AVAL129

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE MTA B 501
ChainResidue
BGLN49
BGLY101
BGLY103
BASP104
BCYS123
BGLU124
BILE125
BVAL129
BGLY154
BASP155
BGLY156
BASP173
BSER174
BSER175
BPRO180
BALA181
BSER183

Functional Information from PROSITE/UniProt
site_idPS01330
Number of Residues14
DetailsPABS_1 Polyamine biosynthesis (PABS) domain signature. VLIIGGGdGgvLrE
ChainResidueDetails
AVAL97-GLU110

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AASP173
BASP173

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING:
ChainResidueDetails
AGLN49
BTYR79
BGLN80
BASP104
BGLU124
BASP155
BASP173
BTYR241
ATYR79
AGLN80
AASP104
AGLU124
AASP155
AASP173
ATYR241
BGLN49

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378
ChainResidueDetails
AMET1
BMET1

221371

PDB entries from 2024-06-19

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