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2O05

Human spermidine synthase

Replaces:  1ZDZ
Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004766molecular_functionspermidine synthase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006595biological_processpolyamine metabolic process
A0006596biological_processpolyamine biosynthetic process
A0006597biological_processspermine biosynthetic process
A0008295biological_processspermidine biosynthetic process
A0016740molecular_functiontransferase activity
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
B0003824molecular_functioncatalytic activity
B0004766molecular_functionspermidine synthase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006595biological_processpolyamine metabolic process
B0006596biological_processpolyamine biosynthetic process
B0006597biological_processspermine biosynthetic process
B0008295biological_processspermidine biosynthetic process
B0016740molecular_functiontransferase activity
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE MTA A 501
ChainResidue
AGLN49
AGLY154
AASP155
AGLY156
AASP173
ASER174
ASER175
APRO180
AALA181
ASER183
AGLY101
AGLY102
AGLY103
AASP104
ACYS123
AGLU124
AILE125
AVAL129

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE MTA B 501
ChainResidue
BGLN49
BGLY101
BGLY103
BASP104
BCYS123
BGLU124
BILE125
BVAL129
BGLY154
BASP155
BGLY156
BASP173
BSER174
BSER175
BPRO180
BALA181
BSER183

Functional Information from PROSITE/UniProt
site_idPS01330
Number of Residues14
DetailsPABS_1 Polyamine biosynthesis (PABS) domain signature. VLIIGGGdGgvLrE
ChainResidueDetails
AVAL97-GLU110

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues470
DetailsDomain: {"description":"PABS"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues22
DetailsBinding site: {}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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