2NVA
The X-ray crystal structure of the Paramecium bursaria Chlorella virus arginine decarboxylase bound to agmatine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0004586 | molecular_function | ornithine decarboxylase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006596 | biological_process | polyamine biosynthetic process |
| A | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0004586 | molecular_function | ornithine decarboxylase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006596 | biological_process | polyamine biosynthetic process |
| B | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0004586 | molecular_function | ornithine decarboxylase activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006596 | biological_process | polyamine biosynthetic process |
| C | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0004586 | molecular_function | ornithine decarboxylase activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006596 | biological_process | polyamine biosynthetic process |
| D | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| E | 0003824 | molecular_function | catalytic activity |
| E | 0004586 | molecular_function | ornithine decarboxylase activity |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0006596 | biological_process | polyamine biosynthetic process |
| E | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| F | 0003824 | molecular_function | catalytic activity |
| F | 0004586 | molecular_function | ornithine decarboxylase activity |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006596 | biological_process | polyamine biosynthetic process |
| F | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| G | 0003824 | molecular_function | catalytic activity |
| G | 0004586 | molecular_function | ornithine decarboxylase activity |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0006596 | biological_process | polyamine biosynthetic process |
| G | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
| H | 0003824 | molecular_function | catalytic activity |
| H | 0004586 | molecular_function | ornithine decarboxylase activity |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0006596 | biological_process | polyamine biosynthetic process |
| H | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 A 2001 |
| Chain | Residue |
| A | ASP67 |
| A | GLY254 |
| A | ARG255 |
| A | ASN292 |
| A | PHE295 |
| A | GLU296 |
| A | TYR353 |
| A | HOH2008 |
| A | HOH2009 |
| A | HOH2138 |
| B | TYR287 |
| A | ALA90 |
| B | CYS324 |
| B | ASP325 |
| A | LEU145 |
| A | HIS176 |
| A | SER179 |
| A | GLY180 |
| A | GLY215 |
| A | GLY216 |
| A | GLU252 |
| site_id | AC2 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 B 2002 |
| Chain | Residue |
| A | TYR287 |
| A | CYS324 |
| A | ASP325 |
| B | LYS48 |
| B | ASP67 |
| B | ALA90 |
| B | HIS176 |
| B | SER179 |
| B | GLY180 |
| B | GLY215 |
| B | GLY216 |
| B | GLU252 |
| B | GLY254 |
| B | ARG255 |
| B | ASN292 |
| B | PHE295 |
| B | GLU296 |
| B | TYR353 |
| B | HOH2011 |
| B | HOH2037 |
| B | HOH2088 |
| site_id | AC3 |
| Number of Residues | 20 |
| Details | BINDING SITE FOR RESIDUE PL2 C 2003 |
| Chain | Residue |
| C | ASP67 |
| C | ALA90 |
| C | HIS176 |
| C | SER179 |
| C | GLY180 |
| C | GLY215 |
| C | GLY216 |
| C | GLU252 |
| C | GLY254 |
| C | ARG255 |
| C | ASN292 |
| C | PHE295 |
| C | GLU296 |
| C | TYR353 |
| C | HOH2008 |
| C | HOH2021 |
| C | HOH2053 |
| D | TYR287 |
| D | CYS324 |
| D | ASP325 |
| site_id | AC4 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 D 2004 |
| Chain | Residue |
| C | TYR287 |
| C | CYS324 |
| C | ASP325 |
| D | LYS48 |
| D | ASP67 |
| D | ALA90 |
| D | HIS176 |
| D | SER179 |
| D | GLY180 |
| D | GLY215 |
| D | GLY216 |
| D | GLU252 |
| D | GLY254 |
| D | ARG255 |
| D | ASN292 |
| D | PHE295 |
| D | GLU296 |
| D | TYR353 |
| D | HOH2005 |
| D | HOH2023 |
| D | HOH2035 |
| site_id | AC5 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 E 2005 |
| Chain | Residue |
| E | HOH2050 |
| E | HOH2163 |
| F | TYR287 |
| F | CYS324 |
| F | ASP325 |
| E | LYS48 |
| E | ASP67 |
| E | ALA90 |
| E | HIS176 |
| E | SER179 |
| E | GLY180 |
| E | GLY215 |
| E | GLY216 |
| E | GLU252 |
| E | GLY254 |
| E | ARG255 |
| E | ASN292 |
| E | PHE295 |
| E | GLU296 |
| E | TYR353 |
| E | HOH2007 |
| site_id | AC6 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 F 2006 |
| Chain | Residue |
| E | TYR287 |
| E | CYS324 |
| E | ASP325 |
| F | LYS48 |
| F | ASP67 |
| F | ALA90 |
| F | HIS176 |
| F | SER179 |
| F | GLY180 |
| F | GLY215 |
| F | GLY216 |
| F | GLU252 |
| F | GLY254 |
| F | ARG255 |
| F | ASN292 |
| F | PHE295 |
| F | GLU296 |
| F | TYR353 |
| F | HOH2009 |
| F | HOH2048 |
| F | HOH2072 |
| site_id | AC7 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE PL2 G 2007 |
| Chain | Residue |
| G | LYS48 |
| G | ASP67 |
| G | ALA90 |
| G | HIS176 |
| G | SER179 |
| G | GLY180 |
| G | GLY215 |
| G | GLY216 |
| G | GLU252 |
| G | GLY254 |
| G | ARG255 |
| G | ASN292 |
| G | PHE295 |
| G | GLU296 |
| G | TYR353 |
| G | HOH2009 |
| G | HOH2042 |
| G | HOH2047 |
| H | TYR287 |
| H | CYS324 |
| H | ASP325 |
| site_id | AC8 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE PL2 H 2008 |
| Chain | Residue |
| G | TYR287 |
| G | CYS324 |
| G | ASP325 |
| H | LYS48 |
| H | ASP67 |
| H | ALA90 |
| H | VAL143 |
| H | HIS176 |
| H | SER179 |
| H | GLY180 |
| H | GLY215 |
| H | GLY216 |
| H | GLU252 |
| H | GLY254 |
| H | ARG255 |
| H | ASN292 |
| H | PHE295 |
| H | GLU296 |
| H | TYR353 |
| H | HOH2015 |
| H | HOH2024 |
| H | HOH2069 |
