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2NMZ

Crystal structure analysis of HIV-1 protease mutant V82A with a inhibitor saquinavir

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 601
ChainResidue
ALYS14
BGLY117
AILE15
AGLY16
AGLY17
AHOH1015
AHOH1053
AHOH1059
AHOH1153
BLYS114

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 602
ChainResidue
APRO1
ALYS55
AHOH1128
BGLY168
BHIS169
BLYS170
BHOH1172

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 603
ChainResidue
APRO39
AGLY40
BSER137
BHOH1135
BHOH1175

site_idAC4
Number of Residues30
DetailsBINDING SITE FOR RESIDUE ROC B 401
ChainResidue
AARG8
ALEU23
AASP25
AGLY27
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
APRO81
AILE84
AHOH1201
BARG108
BASP125
BGLY127
BASP129
BASP130
BGLY148
BGLY149
BILE150
BTHR180
BPRO181
BALA182
BILE184
BHOH1006
BHOH1165
BHOH1180
BHOH1183
BHOH1199

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26
BTHR126
BASP125

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
BASP125

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PDB entries from 2025-12-24

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