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2L6Z

haddock model of GATA1NF:Lmo2LIM2-Ldb1LID with FOG

Functional Information from GO Data
ChainGOidnamespacecontents
A0003700molecular_functionDNA-binding transcription factor activity
A0006355biological_processregulation of DNA-templated transcription
A0006357biological_processregulation of transcription by RNA polymerase II
A0008270molecular_functionzinc ion binding
A0043565molecular_functionsequence-specific DNA binding
B0006357biological_processregulation of transcription by RNA polymerase II
B0061629molecular_functionRNA polymerase II-specific DNA-binding transcription factor binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 239
ChainResidue
ACYS204
ACYS207
ACYS225
ACYS228

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 37
ChainResidue
BCYS11
BCYS14
BHIS27
BCYS32

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 180
ChainResidue
CCYS97
CHIS116
CCYS119
CCYS94

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 181
ChainResidue
CCYS122
CCYS125
CCYS144
CASP147

Functional Information from PROSITE/UniProt
site_idPS00344
Number of Residues25
DetailsGATA_ZN_FINGER_1 GATA-type zinc finger domain. CvNCgata..TplWRRdrt.Ghyl...CNAC
ChainResidueDetails
ACYS204-CYS228

site_idPS00478
Number of Residues36
DetailsLIM_DOMAIN_1 LIM zinc-binding domain signature. CasCdkrirayemtmrvkdkv....YHleCfkCaaCqkhF
ChainResidueDetails
CCYS94-PHE129

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsZinc finger: {"description":"GATA-type 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues19
DetailsRegion: {"description":"Required for interaction with ZFPM1","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine; by EP300","evidences":[{"source":"UniProtKB","id":"P15976","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues33
DetailsZinc finger: {"description":"CCHC FOG-type 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01153","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01153","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues59
DetailsDomain: {"description":"LIM zinc-binding 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00125","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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