Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2JES

Portal protein (gp6) from bacteriophage SPP1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019028	cellular_component	viral capsid
A	0044423	cellular_component	virion component
A	0046718	biological_process	symbiont entry into host cell
A	0046729	cellular_component	viral procapsid
A	0046798	cellular_component	viral portal complex
A	0098006	biological_process	viral DNA genome packaging, headful
A	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
C	0019028	cellular_component	viral capsid
C	0044423	cellular_component	virion component
C	0046718	biological_process	symbiont entry into host cell
C	0046729	cellular_component	viral procapsid
C	0046798	cellular_component	viral portal complex
C	0098006	biological_process	viral DNA genome packaging, headful
C	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
E	0019028	cellular_component	viral capsid
E	0044423	cellular_component	virion component
E	0046718	biological_process	symbiont entry into host cell
E	0046729	cellular_component	viral procapsid
E	0046798	cellular_component	viral portal complex
E	0098006	biological_process	viral DNA genome packaging, headful
E	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
G	0019028	cellular_component	viral capsid
G	0044423	cellular_component	virion component
G	0046718	biological_process	symbiont entry into host cell
G	0046729	cellular_component	viral procapsid
G	0046798	cellular_component	viral portal complex
G	0098006	biological_process	viral DNA genome packaging, headful
G	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
I	0019028	cellular_component	viral capsid
I	0044423	cellular_component	virion component
I	0046718	biological_process	symbiont entry into host cell
I	0046729	cellular_component	viral procapsid
I	0046798	cellular_component	viral portal complex
I	0098006	biological_process	viral DNA genome packaging, headful
I	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
K	0019028	cellular_component	viral capsid
K	0044423	cellular_component	virion component
K	0046718	biological_process	symbiont entry into host cell
K	0046729	cellular_component	viral procapsid
K	0046798	cellular_component	viral portal complex
K	0098006	biological_process	viral DNA genome packaging, headful
K	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
M	0019028	cellular_component	viral capsid
M	0044423	cellular_component	virion component
M	0046718	biological_process	symbiont entry into host cell
M	0046729	cellular_component	viral procapsid
M	0046798	cellular_component	viral portal complex
M	0098006	biological_process	viral DNA genome packaging, headful
M	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
O	0019028	cellular_component	viral capsid
O	0044423	cellular_component	virion component
O	0046718	biological_process	symbiont entry into host cell
O	0046729	cellular_component	viral procapsid
O	0046798	cellular_component	viral portal complex
O	0098006	biological_process	viral DNA genome packaging, headful
O	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
Q	0019028	cellular_component	viral capsid
Q	0044423	cellular_component	virion component
Q	0046718	biological_process	symbiont entry into host cell
Q	0046729	cellular_component	viral procapsid
Q	0046798	cellular_component	viral portal complex
Q	0098006	biological_process	viral DNA genome packaging, headful
Q	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
S	0019028	cellular_component	viral capsid
S	0044423	cellular_component	virion component
S	0046718	biological_process	symbiont entry into host cell
S	0046729	cellular_component	viral procapsid
S	0046798	cellular_component	viral portal complex
S	0098006	biological_process	viral DNA genome packaging, headful
S	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U	0019028	cellular_component	viral capsid
U	0044423	cellular_component	virion component
U	0046718	biological_process	symbiont entry into host cell
U	0046729	cellular_component	viral procapsid
U	0046798	cellular_component	viral portal complex
U	0098006	biological_process	viral DNA genome packaging, headful
U	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
W	0019028	cellular_component	viral capsid
W	0044423	cellular_component	virion component
W	0046718	biological_process	symbiont entry into host cell
W	0046729	cellular_component	viral procapsid
W	0046798	cellular_component	viral portal complex
W	0098006	biological_process	viral DNA genome packaging, headful
W	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
Y	0019028	cellular_component	viral capsid
Y	0044423	cellular_component	virion component
Y	0046718	biological_process	symbiont entry into host cell
Y	0046729	cellular_component	viral procapsid
Y	0046798	cellular_component	viral portal complex
Y	0098006	biological_process	viral DNA genome packaging, headful
Y	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE HG A 701

Chain	Residue
A	CYS55
A	SER85
C	PHE259
C	TYR260
C	ASP262

site_id	AC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA A 801

Chain	Residue
A	GLU60
A	ARG83
C	ASP262

site_id	AC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG C 701

Chain	Residue
C	SER85
E	PHE259
E	TYR260
C	CYS55

site_id	AC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA C 801

Chain	Residue
C	GLU60
C	ARG83
E	ASP262

site_id	AC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG E 701

Chain	Residue
E	CYS55
E	SER85
G	PHE259
G	TYR260

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA E 801

Chain	Residue
E	GLU60
E	ARG83
G	ASP262

site_id	AC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG G 701

Chain	Residue
G	CYS55
G	SER85
I	PHE259
I	TYR260

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA G 801

Chain	Residue
G	GLU60
G	ARG83
I	ASP262

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG I 701

Chain	Residue
I	CYS55
I	SER85
K	PHE259
K	TYR260

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA I 801

Chain	Residue
I	GLU60
I	ARG83
K	ASP262

site_id	BC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG K 701

Chain	Residue
K	CYS55
K	SER85
M	PHE259
M	TYR260

site_id	BC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA K 801

Chain	Residue
K	GLU60
K	ARG83
M	ASP262

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG M 701

Chain	Residue
M	CYS55
M	SER85
O	PHE259
O	ASP262

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA M 801

Chain	Residue
M	GLU60
M	ARG83
O	ASP262

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE HG O 701

Chain	Residue
O	CYS55
O	SER85
Q	PHE259

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA O 801

Chain	Residue
O	GLU60
O	ARG83
Q	ASP262

site_id	BC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE HG Q 701

Chain	Residue
Q	CYS55
Q	SER85
S	PHE259

site_id	BC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA Q 801

Chain	Residue
Q	GLU60
Q	ARG83
S	ASP262

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG S 701

Chain	Residue
S	CYS55
S	SER85
U	PHE259
U	TYR260

site_id	CC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA S 801

Chain	Residue
S	GLU60
S	ARG83
U	ASP262

site_id	CC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG U 701

Chain	Residue
U	CYS55
U	SER85
W	PHE259
W	TYR260

site_id	CC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA U 801

Chain	Residue
U	GLU60
U	ARG83
W	ASP262

site_id	CC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE HG W 701

Chain	Residue
W	CYS55
W	SER85
Y	PHE259

site_id	CC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA W 801

Chain	Residue
W	GLU60
W	ARG83
Y	ASP262

site_id	CC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE HG Y 701

Chain	Residue
A	PHE259
A	TYR260
Y	CYS55
Y	SER85

site_id	CC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA Y 801

Chain	Residue
A	ASP262
Y	GLU60
Y	ARG83

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)