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2JD2

X-ray structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXR, Rv2870c, from Mycobacterium tuberculosis, in complex with manganese

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0008299biological_processisoprenoid biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
A0030145molecular_functionmanganese ion binding
A0030604molecular_function1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
A0046872molecular_functionmetal ion binding
A0050897molecular_functioncobalt ion binding
A0051483biological_processterpenoid biosynthetic process, mevalonate-independent
A0051484biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process
A0070402molecular_functionNADPH binding
B0000287molecular_functionmagnesium ion binding
B0008299biological_processisoprenoid biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
B0030145molecular_functionmanganese ion binding
B0030604molecular_function1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
B0046872molecular_functionmetal ion binding
B0050897molecular_functioncobalt ion binding
B0051483biological_processterpenoid biosynthetic process, mevalonate-independent
B0051484biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process
B0070402molecular_functionNADPH binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A1390
ChainResidue
AASP151
AGLU153
AGLU222
AHOH2158
AHOH2159
AHOH2160

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A1391
ChainResidue
ASER213
AASN218
ALYS219
AHOH2158
AHOH2161
AHOH2162
AALA176
ASER177
AHIS200

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1392
ChainResidue
AARG162
ATRP277
APRO278
AHOH2163

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B1390
ChainResidue
BASP151
BGLU153
BGLU222
BHOH2221
BHOH2222
BHOH2223

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B1391
ChainResidue
BALA176
BSER177
BSER213
BASN218
BLYS219
BHOH2221
BHOH2224
BHOH2225

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00183","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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