2JAT
Structure of deoxyadenosine kinase from M.mycoides with products dcmp and a flexible dcdp bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004138 | molecular_function | deoxyguanosine kinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0009157 | biological_process | deoxyribonucleoside monophosphate biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0019136 | molecular_function | deoxynucleoside kinase activity |
B | 0004138 | molecular_function | deoxyguanosine kinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0006139 | biological_process | nucleobase-containing compound metabolic process |
B | 0009157 | biological_process | deoxyribonucleoside monophosphate biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0019136 | molecular_function | deoxynucleoside kinase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 1203 |
Chain | Residue |
A | SER14 |
A | ASP77 |
A | POP1204 |
A | DCM1205 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG B 1202 |
Chain | Residue |
B | SER14 |
B | ASP77 |
B | POP1203 |
B | DCM1204 |
site_id | AC3 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE POP A 1204 |
Chain | Residue |
A | GLY10 |
A | ALA11 |
A | GLY12 |
A | LYS13 |
A | SER14 |
A | THR15 |
A | ARG145 |
A | MG1203 |
A | DCM1205 |
A | HOH2004 |
A | THR8 |
site_id | AC4 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE DCM A 1205 |
Chain | Residue |
A | VAL9 |
A | LYS13 |
A | VAL33 |
A | TYR42 |
A | TYR43 |
A | GLN54 |
A | ARG78 |
A | ASP83 |
A | PHE86 |
A | GLU150 |
A | MG1203 |
A | POP1204 |
A | HOH2001 |
site_id | AC5 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE POP B 1203 |
Chain | Residue |
B | THR8 |
B | GLY10 |
B | ALA11 |
B | GLY12 |
B | LYS13 |
B | SER14 |
B | THR15 |
B | ARG145 |
B | MG1202 |
B | DCM1204 |
B | HOH2003 |
site_id | AC6 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE DCM B 1204 |
Chain | Residue |
B | VAL9 |
B | LYS13 |
B | VAL33 |
B | TYR42 |
B | TYR43 |
B | GLN54 |
B | ARG78 |
B | ASP83 |
B | PHE86 |
B | GLU150 |
B | MG1202 |
B | POP1203 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1kim |
Chain | Residue | Details |
A | GLU31 | |
A | GLY10 | |
A | ARG147 | |
A | ARG78 |
site_id | CSA2 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1kim |
Chain | Residue | Details |
B | GLU31 | |
B | GLY10 | |
B | ARG147 | |
B | ARG78 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1kim |
Chain | Residue | Details |
A | GLU31 | |
A | ARG78 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1kim |
Chain | Residue | Details |
B | GLU31 | |
B | ARG78 |