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2JAT

Structure of deoxyadenosine kinase from M.mycoides with products dcmp and a flexible dcdp bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0004138molecular_functiondeoxyguanosine kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0009157biological_processdeoxyribonucleoside monophosphate biosynthetic process
A0016301molecular_functionkinase activity
A0019136molecular_functiondeoxynucleoside kinase activity
B0004138molecular_functiondeoxyguanosine kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006139biological_processnucleobase-containing compound metabolic process
B0009157biological_processdeoxyribonucleoside monophosphate biosynthetic process
B0016301molecular_functionkinase activity
B0019136molecular_functiondeoxynucleoside kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1203
ChainResidue
ASER14
AASP77
APOP1204
ADCM1205

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 1202
ChainResidue
BSER14
BASP77
BPOP1203
BDCM1204

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE POP A 1204
ChainResidue
AGLY10
AALA11
AGLY12
ALYS13
ASER14
ATHR15
AARG145
AMG1203
ADCM1205
AHOH2004
ATHR8

site_idAC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE DCM A 1205
ChainResidue
AVAL9
ALYS13
AVAL33
ATYR42
ATYR43
AGLN54
AARG78
AASP83
APHE86
AGLU150
AMG1203
APOP1204
AHOH2001

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE POP B 1203
ChainResidue
BTHR8
BGLY10
BALA11
BGLY12
BLYS13
BSER14
BTHR15
BARG145
BMG1202
BDCM1204
BHOH2003

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DCM B 1204
ChainResidue
BVAL9
BLYS13
BVAL33
BTYR42
BTYR43
BGLN54
BARG78
BASP83
BPHE86
BGLU150
BMG1202
BPOP1203

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1kim
ChainResidueDetails
AGLU31
AGLY10
AARG147
AARG78

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1kim
ChainResidueDetails
BGLU31
BGLY10
BARG147
BARG78

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1kim
ChainResidueDetails
AGLU31
AARG78

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1kim
ChainResidueDetails
BGLU31
BARG78

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PDB entries from 2024-08-07

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