2J0V
The crystal structure of Arabidopsis thaliana RAC7-ROP9: the first RAS superfamily GTPase from the plant kingdom
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003924 | molecular_function | GTPase activity |
| A | 0005525 | molecular_function | GTP binding |
| A | 0005856 | cellular_component | cytoskeleton |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0007015 | biological_process | actin filament organization |
| A | 0007163 | biological_process | establishment or maintenance of cell polarity |
| A | 0007165 | biological_process | signal transduction |
| A | 0007264 | biological_process | small GTPase-mediated signal transduction |
| A | 0008360 | biological_process | regulation of cell shape |
| A | 0009738 | biological_process | abscisic acid-activated signaling pathway |
| A | 0016020 | cellular_component | membrane |
| A | 0019901 | molecular_function | protein kinase binding |
| A | 0030865 | biological_process | cortical cytoskeleton organization |
| A | 0031410 | cellular_component | cytoplasmic vesicle |
| A | 0032956 | biological_process | regulation of actin cytoskeleton organization |
| A | 0042995 | cellular_component | cell projection |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003924 | molecular_function | GTPase activity |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005856 | cellular_component | cytoskeleton |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0007015 | biological_process | actin filament organization |
| B | 0007163 | biological_process | establishment or maintenance of cell polarity |
| B | 0007165 | biological_process | signal transduction |
| B | 0007264 | biological_process | small GTPase-mediated signal transduction |
| B | 0008360 | biological_process | regulation of cell shape |
| B | 0009738 | biological_process | abscisic acid-activated signaling pathway |
| B | 0016020 | cellular_component | membrane |
| B | 0019901 | molecular_function | protein kinase binding |
| B | 0030865 | biological_process | cortical cytoskeleton organization |
| B | 0031410 | cellular_component | cytoplasmic vesicle |
| B | 0032956 | biological_process | regulation of actin cytoskeleton organization |
| B | 0042995 | cellular_component | cell projection |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0003924 | molecular_function | GTPase activity |
| C | 0005525 | molecular_function | GTP binding |
| C | 0005856 | cellular_component | cytoskeleton |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0007015 | biological_process | actin filament organization |
| C | 0007163 | biological_process | establishment or maintenance of cell polarity |
| C | 0007165 | biological_process | signal transduction |
| C | 0007264 | biological_process | small GTPase-mediated signal transduction |
| C | 0008360 | biological_process | regulation of cell shape |
| C | 0009738 | biological_process | abscisic acid-activated signaling pathway |
| C | 0016020 | cellular_component | membrane |
| C | 0019901 | molecular_function | protein kinase binding |
| C | 0030865 | biological_process | cortical cytoskeleton organization |
| C | 0031410 | cellular_component | cytoplasmic vesicle |
| C | 0032956 | biological_process | regulation of actin cytoskeleton organization |
| C | 0042995 | cellular_component | cell projection |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0003924 | molecular_function | GTPase activity |
| D | 0005525 | molecular_function | GTP binding |
| D | 0005856 | cellular_component | cytoskeleton |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0007015 | biological_process | actin filament organization |
| D | 0007163 | biological_process | establishment or maintenance of cell polarity |
| D | 0007165 | biological_process | signal transduction |
| D | 0007264 | biological_process | small GTPase-mediated signal transduction |
| D | 0008360 | biological_process | regulation of cell shape |
| D | 0009738 | biological_process | abscisic acid-activated signaling pathway |
| D | 0016020 | cellular_component | membrane |
| D | 0019901 | molecular_function | protein kinase binding |
| D | 0030865 | biological_process | cortical cytoskeleton organization |
| D | 0031410 | cellular_component | cytoplasmic vesicle |
| D | 0032956 | biological_process | regulation of actin cytoskeleton organization |
| D | 0042995 | cellular_component | cell projection |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A1180 |
| Chain | Residue |
| A | THR20 |
| A | THR38 |
| A | GDP1179 |
| A | HOH2027 |
| A | HOH2069 |
| A | HOH2073 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B1183 |
| Chain | Residue |
| B | HOH2032 |
| B | HOH2093 |
| B | HOH2097 |
| B | THR20 |
| B | THR38 |
| B | GDP1182 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG C1179 |
| Chain | Residue |
| C | THR20 |
| C | THR38 |
| C | GDP1178 |
| C | HOH2021 |
| C | HOH2058 |
| C | HOH2059 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG D1181 |
| Chain | Residue |
| D | THR20 |
| D | THR38 |
| D | GDP1180 |
| D | HOH2018 |
| D | HOH2062 |
| D | HOH2066 |
| site_id | AC5 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE GDP A1179 |
| Chain | Residue |
| A | ALA16 |
| A | VAL17 |
| A | GLY18 |
| A | LYS19 |
| A | THR20 |
| A | CYS21 |
| A | PHE31 |
| A | ILE36 |
| A | LYS119 |
| A | ASP121 |
| A | LEU122 |
| A | SER157 |
| A | SER158 |
| A | LYS159 |
| A | MG1180 |
| A | HOH2027 |
| A | HOH2057 |
| A | HOH2069 |
| A | HOH2070 |
| A | HOH2071 |
| A | HOH2072 |
| A | HOH2073 |
| B | ASP125 |
| B | LYS126 |
| B | GLY127 |
| site_id | AC6 |
| Number of Residues | 26 |
| Details | BINDING SITE FOR RESIDUE GDP B1182 |
| Chain | Residue |
| A | ASP125 |
| A | LYS126 |
| A | GLY127 |
| A | HOH2044 |
| B | ALA16 |
| B | VAL17 |
| B | GLY18 |
| B | LYS19 |
| B | THR20 |
| B | CYS21 |
| B | PHE31 |
| B | ILE36 |
| B | LYS119 |
| B | ASP121 |
| B | LEU122 |
| B | SER157 |
| B | SER158 |
| B | LYS159 |
| B | MG1183 |
| B | HOH2011 |
| B | HOH2017 |
| B | HOH2032 |
| B | HOH2093 |
| B | HOH2094 |
| B | HOH2096 |
| B | HOH2097 |
| site_id | AC7 |
| Number of Residues | 24 |
| Details | BINDING SITE FOR RESIDUE GDP C1178 |
| Chain | Residue |
| C | ALA16 |
| C | VAL17 |
| C | GLY18 |
| C | LYS19 |
| C | THR20 |
| C | CYS21 |
| C | PHE31 |
| C | ILE36 |
| C | LYS119 |
| C | ASP121 |
| C | LEU122 |
| C | SER157 |
| C | SER158 |
| C | LYS159 |
| C | MG1179 |
| C | HOH2010 |
| C | HOH2021 |
| C | HOH2051 |
| C | HOH2057 |
| C | HOH2058 |
| C | HOH2059 |
| D | ASP125 |
| D | LYS126 |
| D | GLY127 |
| site_id | AC8 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE GDP D1180 |
| Chain | Residue |
| C | ASP125 |
| C | LYS126 |
| C | GLY127 |
| D | ALA16 |
| D | VAL17 |
| D | GLY18 |
| D | LYS19 |
| D | THR20 |
| D | CYS21 |
| D | PHE31 |
| D | ILE36 |
| D | LYS119 |
| D | ASP121 |
| D | LEU122 |
| D | SER157 |
| D | SER158 |
| D | LYS159 |
| D | MG1181 |
| D | HOH2018 |
| D | HOH2055 |
| D | HOH2062 |
| D | HOH2063 |
| D | HOH2064 |
| D | HOH2065 |
| D | HOH2066 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| A | GLY13 | |
| D | GLY13 | |
| D | ASP60 | |
| D | THR118 | |
| A | ASP60 | |
| A | THR118 | |
| B | GLY13 | |
| B | ASP60 | |
| B | THR118 | |
| C | GLY13 | |
| C | ASP60 | |
| C | THR118 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 12 |
| Details | LIPID: S-palmitoyl cysteine => ECO:0000305|PubMed:12368496 |
| Chain | Residue | Details |
| A | CYS196 | |
| D | CYS196 | |
| D | CYS203 | |
| D | CYS206 | |
| A | CYS203 | |
| A | CYS206 | |
| B | CYS196 | |
| B | CYS203 | |
| B | CYS206 | |
| C | CYS196 | |
| C | CYS203 | |
| C | CYS206 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLN64 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| B | GLN64 |
| site_id | CSA3 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| D | GLN64 |
| site_id | CSA4 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | ALA16 |
| site_id | CSA5 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| B | ALA16 |
| site_id | CSA6 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| C | ALA16 |
| site_id | CSA7 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| D | ALA16 |
