Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2J0V

The crystal structure of Arabidopsis thaliana RAC7-ROP9: the first RAS superfamily GTPase from the plant kingdom

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003924	molecular_function	GTPase activity
A	0005525	molecular_function	GTP binding
A	0005576	cellular_component	extracellular region
A	0005856	cellular_component	cytoskeleton
A	0005886	cellular_component	plasma membrane
A	0007015	biological_process	actin filament organization
A	0007163	biological_process	establishment or maintenance of cell polarity
A	0007165	biological_process	signal transduction
A	0007264	biological_process	small GTPase-mediated signal transduction
A	0008360	biological_process	regulation of cell shape
A	0009738	biological_process	abscisic acid-activated signaling pathway
A	0016020	cellular_component	membrane
A	0019901	molecular_function	protein kinase binding
A	0030865	biological_process	cortical cytoskeleton organization
A	0031410	cellular_component	cytoplasmic vesicle
A	0032956	biological_process	regulation of actin cytoskeleton organization
A	0042995	cellular_component	cell projection
B	0000166	molecular_function	nucleotide binding
B	0003924	molecular_function	GTPase activity
B	0005525	molecular_function	GTP binding
B	0005576	cellular_component	extracellular region
B	0005856	cellular_component	cytoskeleton
B	0005886	cellular_component	plasma membrane
B	0007015	biological_process	actin filament organization
B	0007163	biological_process	establishment or maintenance of cell polarity
B	0007165	biological_process	signal transduction
B	0007264	biological_process	small GTPase-mediated signal transduction
B	0008360	biological_process	regulation of cell shape
B	0009738	biological_process	abscisic acid-activated signaling pathway
B	0016020	cellular_component	membrane
B	0019901	molecular_function	protein kinase binding
B	0030865	biological_process	cortical cytoskeleton organization
B	0031410	cellular_component	cytoplasmic vesicle
B	0032956	biological_process	regulation of actin cytoskeleton organization
B	0042995	cellular_component	cell projection
C	0000166	molecular_function	nucleotide binding
C	0003924	molecular_function	GTPase activity
C	0005525	molecular_function	GTP binding
C	0005576	cellular_component	extracellular region
C	0005856	cellular_component	cytoskeleton
C	0005886	cellular_component	plasma membrane
C	0007015	biological_process	actin filament organization
C	0007163	biological_process	establishment or maintenance of cell polarity
C	0007165	biological_process	signal transduction
C	0007264	biological_process	small GTPase-mediated signal transduction
C	0008360	biological_process	regulation of cell shape
C	0009738	biological_process	abscisic acid-activated signaling pathway
C	0016020	cellular_component	membrane
C	0019901	molecular_function	protein kinase binding
C	0030865	biological_process	cortical cytoskeleton organization
C	0031410	cellular_component	cytoplasmic vesicle
C	0032956	biological_process	regulation of actin cytoskeleton organization
C	0042995	cellular_component	cell projection
D	0000166	molecular_function	nucleotide binding
D	0003924	molecular_function	GTPase activity
D	0005525	molecular_function	GTP binding
D	0005576	cellular_component	extracellular region
D	0005856	cellular_component	cytoskeleton
D	0005886	cellular_component	plasma membrane
D	0007015	biological_process	actin filament organization
D	0007163	biological_process	establishment or maintenance of cell polarity
D	0007165	biological_process	signal transduction
D	0007264	biological_process	small GTPase-mediated signal transduction
D	0008360	biological_process	regulation of cell shape
D	0009738	biological_process	abscisic acid-activated signaling pathway
D	0016020	cellular_component	membrane
D	0019901	molecular_function	protein kinase binding
D	0030865	biological_process	cortical cytoskeleton organization
D	0031410	cellular_component	cytoplasmic vesicle
D	0032956	biological_process	regulation of actin cytoskeleton organization
D	0042995	cellular_component	cell projection

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A1180

Chain	Residue
A	THR20
A	THR38
A	GDP1179
A	HOH2027
A	HOH2069
A	HOH2073

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG B1183

Chain	Residue
B	HOH2032
B	HOH2093
B	HOH2097
B	THR20
B	THR38
B	GDP1182

site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG C1179

Chain	Residue
C	THR20
C	THR38
C	GDP1178
C	HOH2021
C	HOH2058
C	HOH2059

site_id	AC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG D1181

Chain	Residue
D	THR20
D	THR38
D	GDP1180
D	HOH2018
D	HOH2062
D	HOH2066

site_id	AC5
Number of Residues	25
Details	BINDING SITE FOR RESIDUE GDP A1179

Chain	Residue
A	ALA16
A	VAL17
A	GLY18
A	LYS19
A	THR20
A	CYS21
A	PHE31
A	ILE36
A	LYS119
A	ASP121
A	LEU122
A	SER157
A	SER158
A	LYS159
A	MG1180
A	HOH2027
A	HOH2057
A	HOH2069
A	HOH2070
A	HOH2071
A	HOH2072
A	HOH2073
B	ASP125
B	LYS126
B	GLY127

site_id	AC6
Number of Residues	26
Details	BINDING SITE FOR RESIDUE GDP B1182

Chain	Residue
A	ASP125
A	LYS126
A	GLY127
A	HOH2044
B	ALA16
B	VAL17
B	GLY18
B	LYS19
B	THR20
B	CYS21
B	PHE31
B	ILE36
B	LYS119
B	ASP121
B	LEU122
B	SER157
B	SER158
B	LYS159
B	MG1183
B	HOH2011
B	HOH2017
B	HOH2032
B	HOH2093
B	HOH2094
B	HOH2096
B	HOH2097

site_id	AC7
Number of Residues	24
Details	BINDING SITE FOR RESIDUE GDP C1178

Chain	Residue
C	ALA16
C	VAL17
C	GLY18
C	LYS19
C	THR20
C	CYS21
C	PHE31
C	ILE36
C	LYS119
C	ASP121
C	LEU122
C	SER157
C	SER158
C	LYS159
C	MG1179
C	HOH2010
C	HOH2021
C	HOH2051
C	HOH2057
C	HOH2058
C	HOH2059
D	ASP125
D	LYS126
D	GLY127

site_id	AC8
Number of Residues	25
Details	BINDING SITE FOR RESIDUE GDP D1180

Chain	Residue
C	ASP125
C	LYS126
C	GLY127
D	ALA16
D	VAL17
D	GLY18
D	LYS19
D	THR20
D	CYS21
D	PHE31
D	ILE36
D	LYS119
D	ASP121
D	LEU122
D	SER157
D	SER158
D	LYS159
D	MG1181
D	HOH2018
D	HOH2055
D	HOH2062
D	HOH2063
D	HOH2064
D	HOH2065
D	HOH2066

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	32
Details	Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	52
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

Catalytic Information from CSA

site_id	CSA1
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
A	GLN64

site_id	CSA2
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
B	GLN64

site_id	CSA3
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
D	GLN64

site_id	CSA4
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
A	ALA16

site_id	CSA5
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
B	ALA16

site_id	CSA6
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
C	ALA16

site_id	CSA7
Number of Residues	1
Details	Annotated By Reference To The Literature 1ksj

Chain	Residue	Details
D	ALA16

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)