Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003904 | molecular_function | deoxyribodipyrimidine photo-lyase activity |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0006281 | biological_process | DNA repair |
A | 0006950 | biological_process | response to stress |
A | 0006974 | biological_process | DNA damage response |
A | 0009416 | biological_process | response to light stimulus |
A | 0016829 | molecular_function | lyase activity |
A | 0071949 | molecular_function | FAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL A 902 |
Chain | Residue |
A | HIS117 |
A | HOH2089 |
A | HOH2090 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 A 1423 |
Chain | Residue |
A | HOH2233 |
A | VAL135 |
A | TYR136 |
A | THR137 |
A | ARG167 |
A | ASP360 |
A | HOH2232 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 A 1424 |
Chain | Residue |
A | THR42 |
A | ARG46 |
A | GLU77 |
A | ARG336 |
A | HIS337 |
A | HOH2234 |
A | HOH2235 |
site_id | AC4 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE FAD A 1421 |
Chain | Residue |
A | TYR197 |
A | GLY209 |
A | SER210 |
A | ARG211 |
A | LEU212 |
A | SER213 |
A | PHE216 |
A | TRP241 |
A | GLU244 |
A | LEU245 |
A | TRP247 |
A | ARG248 |
A | PHE307 |
A | LEU308 |
A | ASN310 |
A | ARG313 |
A | ALA317 |
A | ASP341 |
A | GLY342 |
A | ASP343 |
A | VAL346 |
A | ASN347 |
A | GLN349 |
A | GLY350 |
A | TRP351 |
A | HOH2210 |
A | HOH2223 |
A | HOH2224 |
A | HOH2225 |
A | HOH2226 |
site_id | AC5 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN A 1422 |
Chain | Residue |
A | ARG9 |
A | GLY10 |
A | VAL34 |
A | LEU35 |
A | ASP36 |
A | ASN39 |
A | LEU40 |
A | PHE50 |
A | SER96 |
A | THR98 |
A | ARG104 |
A | LEU218 |
A | HOH2071 |
A | HOH2228 |
A | HOH2229 |
A | HOH2230 |
A | HOH2231 |
Functional Information from PROSITE/UniProt
site_id | PS00394 |
Number of Residues | 13 |
Details | DNA_PHOTOLYASES_1_1 DNA photolyases class 1 signature 1. TGvPLVDAaMReL |
Chain | Residue | Details |
A | THR290-LEU302 | |
site_id | PS00691 |
Number of Residues | 20 |
Details | DNA_PHOTOLYASES_1_2 DNA photolyases class 1 signature 2. NRaRMNaAQFAvKhLllpWK |
Chain | Residue | Details |
A | ASN310-LYS329 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 122 |
Details | Domain: {"description":"Photolyase/cryptochrome alpha/beta"} |
site_id | SWS_FT_FI2 |
Number of Residues | 29 |
Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | Region: {"description":"Interaction with DNA","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI4 |
Number of Residues | 11 |
Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
site_id | SWS_FT_FI5 |
Number of Residues | 10 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"11707580","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI7 |
Number of Residues | 3 |
Details | Site: {"description":"Electron transfer via tryptophanyl radical","evidences":[{"evidenceCode":"ECO:0000250"}]} |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1dnp |
Chain | Residue | Details |
A | TRP328 | |
A | TRP275 | |
A | TRP351 | |