2IVO
Structure of UP1 protein
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000049 | molecular_function | tRNA binding |
| A | 0000408 | cellular_component | EKC/KEOPS complex |
| A | 0002949 | biological_process | tRNA threonylcarbamoyladenosine modification |
| A | 0003727 | molecular_function | single-stranded RNA binding |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006400 | biological_process | tRNA modification |
| A | 0016747 | molecular_function | acyltransferase activity, transferring groups other than amino-acyl groups |
| A | 0061711 | molecular_function | tRNA N(6)-L-threonylcarbamoyladenine synthase activity |
| B | 0000049 | molecular_function | tRNA binding |
| B | 0000408 | cellular_component | EKC/KEOPS complex |
| B | 0002949 | biological_process | tRNA threonylcarbamoyladenosine modification |
| B | 0003727 | molecular_function | single-stranded RNA binding |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006400 | biological_process | tRNA modification |
| B | 0016747 | molecular_function | acyltransferase activity, transferring groups other than amino-acyl groups |
| B | 0061711 | molecular_function | tRNA N(6)-L-threonylcarbamoyladenine synthase activity |
| C | 0000049 | molecular_function | tRNA binding |
| C | 0000408 | cellular_component | EKC/KEOPS complex |
| C | 0002949 | biological_process | tRNA threonylcarbamoyladenosine modification |
| C | 0003727 | molecular_function | single-stranded RNA binding |
| C | 0005506 | molecular_function | iron ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006400 | biological_process | tRNA modification |
| C | 0016747 | molecular_function | acyltransferase activity, transferring groups other than amino-acyl groups |
| C | 0061711 | molecular_function | tRNA N(6)-L-threonylcarbamoyladenine synthase activity |
| D | 0000049 | molecular_function | tRNA binding |
| D | 0000408 | cellular_component | EKC/KEOPS complex |
| D | 0002949 | biological_process | tRNA threonylcarbamoyladenosine modification |
| D | 0003727 | molecular_function | single-stranded RNA binding |
| D | 0005506 | molecular_function | iron ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006400 | biological_process | tRNA modification |
| D | 0016747 | molecular_function | acyltransferase activity, transferring groups other than amino-acyl groups |
| D | 0061711 | molecular_function | tRNA N(6)-L-threonylcarbamoyladenine synthase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE WO4 A 1326 |
| Chain | Residue |
| A | GLY81 |
| A | PRO82 |
| A | ARG85 |
| A | GLN313 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE WO4 A 1327 |
| Chain | Residue |
| A | ARG208 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE WO4 B 1326 |
| Chain | Residue |
| B | GLY81 |
| B | PRO82 |
| B | ARG85 |
| B | GLN313 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE WO4 C 1326 |
| Chain | Residue |
| C | GLY81 |
| C | PRO82 |
| C | ARG85 |
| C | GLN313 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE WO4 C 1327 |
| Chain | Residue |
| C | ARG208 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE WO4 D 1326 |
| Chain | Residue |
| D | GLY81 |
| D | ARG85 |
| D | GLN313 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE WO4 A 1328 |
| Chain | Residue |
| A | ARG85 |
| A | ARG92 |
| A | THR309 |
| A | ILE310 |
| A | VAL311 |
| D | ARG99 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE WO4 C 1328 |
| Chain | Residue |
| B | ARG99 |
| C | ARG85 |
| C | ARG92 |
| C | ILE310 |
| C | VAL311 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE WO4 A 1329 |
| Chain | Residue |
| A | ARG305 |
| D | ARG305 |
| site_id | BC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE WO4 B 1327 |
| Chain | Residue |
| B | ARG305 |
| C | ARG305 |
Functional Information from PROSITE/UniProt
| site_id | PS01016 |
| Number of Residues | 21 |
| Details | GLYCOPROTEASE Glycoprotease family signature. RAlavkYRkPiVgvnHciAHV |
| Chain | Residue | Details |
| A | ARG92-VAL112 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01446","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17766251","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 32 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
