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2IFW

Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0070007molecular_functionglutamic-type endopeptidase activity
B0006508biological_processproteolysis
B0070007molecular_functionglutamic-type endopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY A 398
ChainResidue
AVAL2
AGLU3
AASN5
BVAL2
BGLU3
DAAR507

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 416
ChainResidue
AVAL74
AGLU121
AGLU69
ATRP70
AGLU73

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 397
ChainResidue
AGLN48
BASN188
BASP190
BHOH322
BHOH371
BHOH403

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACY B 400
ChainResidue
BASP147

site_idAC5
Number of Residues34
DetailsBINDING SITE FOR CHAIN C OF HEPTAPEPTIDE
ChainResidue
AASN5
ATRP6
ATHR37
AGLY44
AASP45
AGLN53
AASP57
ATYR59
AASP65
ATRP67
AGLU69
ATYR71
APRO72
AVAL74
ASER75
AASP77
AGLU136
APHE138
AGLU139
AGLU140
ACYS141
AASN142
ASER143
ATHR182
AHOH329
BGLU3
BASP45
BGLN48
BILE185
CHOH337
CHOH408
CHOH412
CHOH413
DAAR507

site_idAC6
Number of Residues31
DetailsBINDING SITE FOR CHAIN D OF HEPTAPEPTIDE
ChainResidue
AGLU3
AASP45
AGLN48
AACY398
BASN5
BTRP6
BTHR37
BGLY44
BASP45
BGLN48
BGLN53
BASP57
BTYR59
BASP65
BTRP67
BGLU69
BTYR71
BPRO72
BVAL74
BSER75
BASP77
BGLU136
BPHE138
BGLU139
BGLU140
BCYS141
BASN142
BSER143
BTHR182
BHOH392
CAAR507

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:14993599
ChainResidueDetails
AGLU136
BGLU136

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Transition state stabilizer
ChainResidueDetails
AGLN53
BGLN53

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1s2k
ChainResidueDetails
AGLU136
AGLN53

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1s2k
ChainResidueDetails
BGLU136
BGLN53

site_idMCSA1
Number of Residues2
DetailsM-CSA 595
ChainResidueDetails
AGLN53electrostatic stabiliser
AGLU136proton acceptor, proton donor

site_idMCSA2
Number of Residues2
DetailsM-CSA 595
ChainResidueDetails
BGLN53electrostatic stabiliser
BGLU136proton acceptor, proton donor

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PDB entries from 2024-05-01

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