2IER
Crystal Structure of Aquifex aeolicus LpxC Complexed with Uridine 5'-Diphosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006796 | biological_process | phosphate-containing compound metabolic process |
A | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
A | 0009245 | biological_process | lipid A biosynthetic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0019637 | biological_process | organophosphate metabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0103117 | molecular_function | UDP-3-O-acyl-N-acetylglucosamine deacetylase activity |
A | 1901135 | biological_process | carbohydrate derivative metabolic process |
B | 0006796 | biological_process | phosphate-containing compound metabolic process |
B | 0008759 | molecular_function | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
B | 0009245 | biological_process | lipid A biosynthetic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0019637 | biological_process | organophosphate metabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0103117 | molecular_function | UDP-3-O-acyl-N-acetylglucosamine deacetylase activity |
B | 1901135 | biological_process | carbohydrate derivative metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN A 601 |
Chain | Residue |
A | HIS79 |
A | HIS238 |
A | ASP242 |
A | ZN606 |
A | HOH802 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN B 602 |
Chain | Residue |
B | HOH808 |
B | HIS79 |
B | HIS238 |
B | ASP242 |
B | ZN607 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ZN A 603 |
Chain | Residue |
A | HIS58 |
A | HIS200 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ZN B 604 |
Chain | Residue |
B | HIS58 |
B | HIS200 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN A 605 |
Chain | Residue |
A | GLY2 |
A | GLU126 |
B | ILE27 |
B | HIS29 |
B | GLU95 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN A 606 |
Chain | Residue |
A | GLU78 |
A | HIS265 |
A | ZN601 |
A | HOH802 |
A | HOH830 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ZN B 607 |
Chain | Residue |
B | HIS58 |
B | SER59 |
B | GLU78 |
B | HIS265 |
B | ZN602 |
B | HOH808 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ZN A 608 |
Chain | Residue |
A | HIS58 |
A | PLM701 |
A | UDP801 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ZN B 609 |
Chain | Residue |
B | HIS58 |
B | PLM702 |
B | UDP802 |
site_id | BC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE UDP A 801 |
Chain | Residue |
A | HIS58 |
A | TYR157 |
A | GLY159 |
A | GLU160 |
A | PHE161 |
A | GLU197 |
A | LYS239 |
A | ARG262 |
A | GLY264 |
A | HIS265 |
A | ZN608 |
A | PLM701 |
A | HOH808 |
A | HOH817 |
A | HOH830 |
A | HOH837 |
A | HOH840 |
site_id | BC2 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE UDP B 802 |
Chain | Residue |
B | HIS58 |
B | TYR157 |
B | GLY159 |
B | GLU160 |
B | PHE161 |
B | PHE194 |
B | GLU197 |
B | LYS239 |
B | ARG262 |
B | GLY264 |
B | HIS265 |
B | ZN609 |
B | HOH810 |
site_id | BC3 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PLM A 701 |
Chain | Residue |
A | ILE18 |
A | HIS19 |
A | PHE192 |
A | GLU197 |
A | ILE198 |
A | GLY210 |
A | ZN608 |
A | UDP801 |
A | HOH843 |
B | SER211 |
B | LEU212 |
B | PLM702 |
site_id | BC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE PLM B 702 |
Chain | Residue |
A | TYR224 |
A | PLM701 |
B | ILE18 |
B | HIS19 |
B | ILE198 |
B | GLY210 |
B | SER211 |
B | TYR224 |
B | ZN609 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 501 |
Chain | Residue |
A | HIS85 |
A | GLU88 |
A | LEU153 |
A | VAL254 |
A | LYS255 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00388, ECO:0000305|PubMed:15705580 |
Chain | Residue | Details |
A | HIS265 | |
B | HIS265 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00388, ECO:0000269|PubMed:12819349, ECO:0000269|PubMed:15705580, ECO:0007744|PDB:1P42, ECO:0007744|PDB:1YH8, ECO:0007744|PDB:1YHC |
Chain | Residue | Details |
A | HIS79 | |
A | HIS238 | |
A | ASP242 | |
B | HIS79 | |
B | HIS238 | |
B | ASP242 |