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2I5R

Structure of small Toprim domain-containing protein from B. stearothermophilus in complex with Mg2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0006364biological_processrRNA processing
A0043822molecular_functionribonuclease M5 activity
A0046872molecular_functionmetal ion binding
B0006364biological_processrRNA processing
B0043822molecular_functionribonuclease M5 activity
B0046872molecular_functionmetal ion binding
C0006364biological_processrRNA processing
C0043822molecular_functionribonuclease M5 activity
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 301
ChainResidue
AASP58
AASP60
AGLU88
AHOH442
AHOH443
AHOH468

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 302
ChainResidue
BHOH438
BASP58
BASP60
BHOH414

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 501
ChainResidue
BARG3
CHIS96
CGLN99
CARG103
CARG115

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 502
ChainResidue
CLYS65
CARG68
CARG109
CHOH621

site_idAC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE MES C 601
ChainResidue
CGLU11
CGLY12
CASP58
CASP60
CGLU61
CALA62
CARG87
CGLU88
CHOH615
CHOH652
CHOH678
CHOH679
CHOH683
CHOH685

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 400
ChainResidue
ALEU23
AGLU25
APRO26
AVAL27
AILE29
AHOH453

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 404
ChainResidue
AGLU64
AARG67
AARG71
ATYR81
AHOH451
CLEU48
CGLY50
CTYR51
CVAL53
CPHE74

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 401
ChainResidue
BLEU102
BARG103
BHOH413
CLEU23
CGLU25
CPRO26
CVAL27
CILE29

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 403
ChainResidue
BASN24
BASP107
BVAL108
BHOH407
BHOH422
CVAL28
CILE29

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL C 402
ChainResidue
BGLU47
BHOH409
CTHR35
CILE36
CLYS65
CLEU66
CGLN69
CGLU111

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL C 405
ChainResidue
BHOH435
CALA59
CGLU64
CARG84

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PDB entries from 2024-10-30

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