2I4O
Rhodopseudomonas palustris prolyl-tRNA synthetase in complex with ATP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
| A | 0004827 | molecular_function | proline-tRNA ligase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006412 | biological_process | translation |
| A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
| A | 0006433 | biological_process | prolyl-tRNA aminoacylation |
| A | 0016874 | molecular_function | ligase activity |
| A | 0140101 | molecular_function | catalytic activity, acting on a tRNA |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
| B | 0004827 | molecular_function | proline-tRNA ligase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006412 | biological_process | translation |
| B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
| B | 0006433 | biological_process | prolyl-tRNA aminoacylation |
| B | 0016874 | molecular_function | ligase activity |
| B | 0140101 | molecular_function | catalytic activity, acting on a tRNA |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
| C | 0004827 | molecular_function | proline-tRNA ligase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006412 | biological_process | translation |
| C | 0006418 | biological_process | tRNA aminoacylation for protein translation |
| C | 0006433 | biological_process | prolyl-tRNA aminoacylation |
| C | 0016874 | molecular_function | ligase activity |
| C | 0140101 | molecular_function | catalytic activity, acting on a tRNA |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 439 |
| Chain | Residue |
| A | GLU282 |
| A | GLN285 |
| A | MG440 |
| A | ATP442 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 440 |
| Chain | Residue |
| A | GLU282 |
| A | MG439 |
| A | ATP442 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 441 |
| Chain | Residue |
| A | ATP442 |
| A | HOH448 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 439 |
| Chain | Residue |
| B | GLU282 |
| B | GLN285 |
| B | MG440 |
| B | ATP442 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 440 |
| Chain | Residue |
| B | GLU282 |
| B | MG439 |
| B | ATP442 |
| C | ARG144 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG B 441 |
| Chain | Residue |
| B | ATP442 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG C 439 |
| Chain | Residue |
| C | GLU282 |
| C | GLN285 |
| C | ATP441 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG C 440 |
| Chain | Residue |
| C | ATP441 |
| C | HOH497 |
| site_id | AC9 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE ATP A 442 |
| Chain | Residue |
| A | ARG140 |
| A | GLU142 |
| A | VAL149 |
| A | MET150 |
| A | ARG151 |
| A | GLY152 |
| A | PHE155 |
| A | MET157 |
| A | GLU282 |
| A | VAL283 |
| A | GLY284 |
| A | GLY319 |
| A | ARG322 |
| A | MG439 |
| A | MG440 |
| A | MG441 |
| A | HOH445 |
| A | HOH448 |
| site_id | BC1 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE ATP B 442 |
| Chain | Residue |
| B | ARG140 |
| B | GLU142 |
| B | VAL149 |
| B | ARG151 |
| B | GLY152 |
| B | PHE155 |
| B | MET157 |
| B | GLU282 |
| B | VAL283 |
| B | GLY284 |
| B | GLY319 |
| B | ARG322 |
| B | MG439 |
| B | MG440 |
| B | MG441 |
| B | HOH443 |
| C | ARG144 |
| site_id | BC2 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE ATP C 441 |
| Chain | Residue |
| B | ARG144 |
| C | ARG140 |
| C | GLU142 |
| C | VAL149 |
| C | MET150 |
| C | ARG151 |
| C | GLY152 |
| C | PHE155 |
| C | MET157 |
| C | GLU282 |
| C | VAL283 |
| C | GLY284 |
| C | GLN285 |
| C | GLY319 |
| C | ARG322 |
| C | MG439 |
| C | MG440 |
| C | HOH442 |
| C | HOH497 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1qf6 |
| Chain | Residue | Details |
| A | ARG140 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1qf6 |
| Chain | Residue | Details |
| B | ARG140 |
| site_id | CSA3 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1qf6 |
| Chain | Residue | Details |
| C | ARG140 |
