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2I3V

Measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor: Structure of G725C mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
C0015276molecular_functionligand-gated monoatomic ion channel activity
C0016020cellular_componentmembrane
D0015276molecular_functionligand-gated monoatomic ion channel activity
D0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
AGLU42
ALYS45
AHIS46

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 302
ChainResidue
AHIS23
AGLU24

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 303
ChainResidue
BGLU166
DHIS23
DGLU24

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ZN B 304
ChainResidue
BHIS23

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 305
ChainResidue
BGLU42
BHIS46
DGLU166

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN C 306
ChainResidue
AASP139
CASP65
CASP67

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN D 307
ChainResidue
DGLU98
DHOH429

site_idAC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GLU A 401
ChainResidue
ATYR61
APRO89
ALEU90
ATHR91
AARG96
AGLY141
ASER142
ATHR143
AGLU193
ATYR220
AHOH407
AHOH419
AHOH445

site_idAC9
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GLU B 402
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BLEU138
BGLY141
BSER142
BTHR143
BGLU193
BTYR220
BHOH410
BHOH412

site_idBC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GLU C 403
ChainResidue
CTYR61
CPRO89
CTHR91
CARG96
CLEU138
CGLY141
CSER142
CTHR143
CGLU193
CHOH404
CHOH440
CHOH441

site_idBC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GLU D 404
ChainResidue
DTYR61
DPRO89
DLEU90
DTHR91
DARG96
DGLY141
DSER142
DTHR143
DGLU193
DHOH441

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues80
DetailsTRANSMEM: Helical
ChainResidueDetails
AALA134-VAL154
BALA134-VAL154
CALA134-VAL154
DALA134-VAL154

site_idSWS_FT_FI2
Number of Residues124
DetailsTOPO_DOM: Cytoplasmic
ChainResidueDetails
APHE155-VAL181
AGLU201-CYS206
BPHE155-VAL181
BGLU201-CYS206
CPHE155-VAL181
CGLU201-CYS206
DPHE155-VAL181
DGLU201-CYS206

site_idSWS_FT_FI3
Number of Residues60
DetailsINTRAMEM: Helical; Pore-forming
ChainResidueDetails
AARG182-ASN197
BARG182-ASN197
CARG182-ASN197
DARG182-ASN197

site_idSWS_FT_FI4
Number of Residues8
DetailsINTRAMEM:
ChainResidueDetails
AGLU198-ILE200
BGLU198-ILE200
CGLU198-ILE200
DGLU198-ILE200

site_idSWS_FT_FI5
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
BSER142
BTHR143
BGLU193
CPRO89
CTHR91
CARG96
CSER142
CTHR143
CGLU193
DPRO89
ATHR91
DTHR91
DARG96
DSER142
DTHR143
DGLU193
AARG96
ASER142
ATHR143
AGLU193
BPRO89
BTHR91
BARG96

site_idSWS_FT_FI6
Number of Residues12
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
DARG64
DARG148
DLYS240
AARG148
ALYS240
BARG64
BARG148
BLYS240
CARG64
CARG148
CLYS240

site_idSWS_FT_FI7
Number of Residues4
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121
BILE121
CILE121
DILE121

site_idSWS_FT_FI8
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150
BSER150
CSER150
DSER150

site_idSWS_FT_FI9
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184
BSER184
CSER184
DSER184

site_idSWS_FT_FI10
Number of Residues4
DetailsLIPID: S-palmitoyl cysteine => ECO:0000250
ChainResidueDetails
AILE200
BILE200
CILE200
DILE200

site_idSWS_FT_FI11
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3
BASN3
CASN3
DASN3

222624

PDB entries from 2024-07-17

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