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2H5C

0.82A resolution crystal structure of alpha-lytic protease at pH 5

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE SO4 A 246
ChainResidue
AARG48
AHOH559
AHOH568
AHOH596
AHOH635
AHOH698
AHOH707
AHOH718
AHOH719
AARG120
AGLN237
ATYR238
AHOH389
AHOH390
AHOH391
AHOH485
AHOH534

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 A 247
ChainResidue
AALA15
AASN15
AARG230
APRO233
AHOH333
AHOH403
AHOH434
AHOH460
AHOH488
AHOH509
AHOH633
AHOH634
AHOH643

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE SO4 A 248
ChainResidue
AHIS57
AARG122
AARG192
AGLY193
ASER195
AGOL253
AHOH424
AHOH459
AHOH491
AHOH668
AHOH669
AHOH670
AHOH671
AHOH676

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 203
ChainResidue
ATHR59
AVAL59
AARG90
AHOH386
AHOH393
AHOH468
AHOH562
AHOH626
AHOH627
AHOH708

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 A 204
ChainResidue
AALA48
ATHR49
ASER110
AALA176
AARG178
AHOH309
AHOH349
AHOH461
AHOH555
AHOH573
AHOH661
AHOH662
AHOH730

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 205
ChainResidue
ATHR168
AARG178
AHOH417
AHOH549
AHOH709
AHOH731

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 206
ChainResidue
AGLN219
ASER219
AHOH353
AHOH355
AHOH630
AHOH700

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 249
ChainResidue
AASN36
ATHR62
AARG65
AHOH365
AHOH599
AHOH701
AHOH702

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 250
ChainResidue
AALA131
AVAL132
ALYS165
AHOH566
AHOH646
AHOH703
AHOH711

site_idBC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SO4 A 251
ChainResidue
AHOH529
AHOH548
AHOH567
AHOH590
AHOH611
AHOH623
AHOH665
AHOH674
AHOH712
AARG141
AHOH314
AHOH380
AHOH432
AHOH527
AHOH528

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 252
ChainResidue
AASN217
AGLN219
AHOH569
AHOH679
AHOH720
AHOH721
AHOH722

site_idBC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GOL A 253
ChainResidue
AHIS57
AARG122
ATYR171
AGLU174
AARG192
ASER214
AGLY215
ASO4248
AHOH337
AHOH474
AHOH477
AHOH491
AHOH629
AHOH671
AHOH745

site_idBC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 254
ChainResidue
APHE120
AVAL120
ATHR120
AALA173
AGLU174
AHOH489
AHOH531
AHOH532
AHOH576

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VTAGHC
ChainResidueDetails
AVAL53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. CMgrGDSGGSWI
ChainResidueDetails
ACYS189-ILE200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system => ECO:0000250
ChainResidueDetails
AHIS57
AASP102
ASER195

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 1ssx
ChainResidueDetails
AASP102
ASER195
AGLY193
AHIS57
ASER214

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ssx
ChainResidueDetails
AASP102
ASER195
AGLY193
AHIS57

site_idMCSA1
Number of Residues5
DetailsM-CSA 609
ChainResidueDetails
AHIS57proton acceptor, proton donor
AASP102electrostatic stabiliser
AGLY193electrostatic stabiliser
ASER195electrostatic stabiliser
ASER214electrostatic stabiliser

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PDB entries from 2024-09-11

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