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2GUF

In meso crystal structure of the cobalamin transporter, BtuB

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0006811biological_processmonoatomic ion transport
A0009279cellular_componentcell outer membrane
A0015288molecular_functionporin activity
A0015420molecular_functionABC-type vitamin B12 transporter activity
A0015889biological_processcobalamin transport
A0016020cellular_componentmembrane
A0019904molecular_functionprotein domain specific binding
A0034220biological_processmonoatomic ion transmembrane transport
A0035461biological_processvitamin transmembrane transport
A0046872molecular_functionmetal ion binding
A0046930cellular_componentpore complex
A0090482molecular_functionvitamin transmembrane transporter activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MPG A 701
ChainResidue
ATRP214
ATYR256
AASN302
ALEU342
AALA466
AVAL479
ATYR481
AMPG704
AMPG705

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE MPG A 702
ChainResidue
AILE140
ASER141
AALA142
AVAL154
AASP171
ALYS200
ATHR201
ALEU202
AGLY222
AASP224
ALEU559
AGLY590
ATYR592

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MPG A 703
ChainResidue
ALEU254
ASER263
AVAL298
ATRP300
AVAL315
ATHR338
ATYR383
AHOH1143
AHOH1153

site_idAC4
Number of Residues16
DetailsBINDING SITE FOR RESIDUE MPG A 704
ChainResidue
AASN302
AALA313
AGLY314
AALA357
AARG358
AGLY369
ATHR370
ATRP371
ATHR391
ATRP431
AALA468
APHE470
ATHR472
AMPG701
AMPG705
AMPD904

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE MPG A 705
ChainResidue
AILE311
AGLY344
AALA357
ATRP371
ATHR472
AHIS477
AVAL479
AVAL503
ATYR505
AMPG701
AMPG704

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MPG A 706
ChainResidue
ATYR296
ATRP317
ALYS319

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MPG A 707
ChainResidue
AGLY307
AGLN346
ATYR520
ATYR522
ASER545
AMPG711
AHOH1133
AHOH1156

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MPG A 708
ChainResidue
ATHR138
AVAL154
ATYR221
AGLN248
APHE594
AHOH1103

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MPG A 709
ChainResidue
ALEU160
AGLY161
AASP162
ALYS163
ATHR164
AHIS208
AGLY216
APHE217
ATYR586

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MPG A 710
ChainResidue
ATHR373
ASER374
AALA375
AALA387
ASER388
AGLU419
AGLY420
AALA421
AMPG711

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MPG A 711
ChainResidue
AMPG710
AGLN346
ATHR373
ATYR389
ALYS416
ATRP418
AMPG707

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 801
ChainResidue
ATHR30
AARG31
AGLN105
AARG106
AHOH1162

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MPD A 901
ChainResidue
AASN86
AASP95
ATYR223
ASER272
AMET293
AHOH999
AHOH1051

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MPD A 902
ChainResidue
AGLN318
AGLN320
AGLN335
AASN337
AALA395
AASN397
AHOH1167

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MPD A 903
ChainResidue
ASER91
AALA94
ATYR405
ATYR446
ATYR453
AHOH1026

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MPD A 904
ChainResidue
ASER286
ASER359
AHIS368
AGLY369
AALA427
AASP471
AMPG704

Functional Information from PROSITE/UniProt
site_idPS01156
Number of Residues18
DetailsTONB_DEPENDENT_REC_2 TonB-dependent receptor (TBDR) proteins signature 2. YgyqTaGReYtLSGsYtF
ChainResidueDetails
ATYR577-PHE594

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues267
DetailsTransmembrane: {"description":"Beta stranded"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues69
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues7
DetailsMotif: {"description":"TonB box"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1NQH","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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