2GNW

Crystal structure of non-symbiotic plant hemoglobin from rice, B10 mutant F40W

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005634	cellular_component	nucleus
A	0005737	cellular_component	cytoplasm
A	0010167	biological_process	response to nitrate
A	0016491	molecular_function	oxidoreductase activity
A	0019825	molecular_function	oxygen binding
A	0020037	molecular_function	heme binding
A	0046872	molecular_function	metal ion binding
A	0071731	biological_process	response to nitric oxide
A	0080033	biological_process	response to nitrite
B	0005634	cellular_component	nucleus
B	0005737	cellular_component	cytoplasm
B	0010167	biological_process	response to nitrate
B	0016491	molecular_function	oxidoreductase activity
B	0019825	molecular_function	oxygen binding
B	0020037	molecular_function	heme binding
B	0046872	molecular_function	metal ion binding
B	0071731	biological_process	response to nitric oxide
B	0080033	biological_process	response to nitrite

Functional Information from PDB Data

site_id	AC1
Number of Residues	15
Details	BINDING SITE FOR RESIDUE HEM A 166

Chain	Residue
A	MET53
A	TYR111
A	VAL113
A	HIS117
A	PHE118
A	VAL121
A	VAL154
A	PHE54
A	LYS69
A	HIS73
A	SER76
A	VAL77
A	ARG103
A	LEU104
A	HIS108

---

site_id	AC2
Number of Residues	15
Details	BINDING SITE FOR RESIDUE HEM B 166

Chain	Residue
B	MET53
B	LYS69
B	HIS73
B	VAL77
B	ARG103
B	LEU104
B	THR107
B	HIS108
B	TYR111
B	VAL113
B	HIS117
B	PHE118
B	VAL121
B	LEU153
B	VAL154

---

Functional Information from PROSITE/UniProt

site_id	PS00208
Number of Residues	12
Details	PLANT_GLOBIN Plant hemoglobins signature. NPkLktHAmsvF

Chain	Residue	Details
A	ASN67-PHE78

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	300
Details	Domain: {"description":"Globin","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	32
Details	Motif: {"description":"Homodimerization","evidences":[{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16893175","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNW","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P68168","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16893175","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Binding site: {"description":"distal binding residue","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16893175","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNW","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16893175","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNW","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	2
Details	Binding site: {"description":"proximal binding residue","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16893175","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GNW","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	2
Details	Site: {"description":"Homodimerization","evidences":[{"source":"PubMed","id":"10986467","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D8U","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---