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2GN1

Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 2.2A resolution (Triclinic form with one dimer of TdcB in the asymmetric unit)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003941molecular_functionL-serine ammonia-lyase activity
A0004794molecular_functionthreonine deaminase activity
A0006520biological_processamino acid metabolic process
A0006565biological_processL-serine catabolic process
A0006567biological_processthreonine catabolic process
A0009097biological_processisoleucine biosynthetic process
A0016829molecular_functionlyase activity
A0030170molecular_functionpyridoxal phosphate binding
A0070689biological_processL-threonine catabolic process to propionate
B0000166molecular_functionnucleotide binding
B0003941molecular_functionL-serine ammonia-lyase activity
B0004794molecular_functionthreonine deaminase activity
B0006520biological_processamino acid metabolic process
B0006565biological_processL-serine catabolic process
B0006567biological_processthreonine catabolic process
B0009097biological_processisoleucine biosynthetic process
B0016829molecular_functionlyase activity
B0030170molecular_functionpyridoxal phosphate binding
B0070689biological_processL-threonine catabolic process to propionate
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 400
ChainResidue
ATYR220
AASP256
AHOH465
AHOH466
AHOH550
BARG229

Functional Information from PROSITE/UniProt
site_idPS00165
Number of Residues14
DetailsDEHYDRATASE_SER_THR Serine/threonine dehydratases pyridoxal-phosphate attachment site. Enmqr.TGSFKIRGA
ChainResidueDetails
AGLU49-ALA62

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
BARG53
BGLN88
BASP119
BASN314
AARG53
AGLN88
AASP119
AASN314

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine
ChainResidueDetails
ALLP58
BLLP58

220472

PDB entries from 2024-05-29

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