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2GMU

Crystal structure of E coli GDP-4-keto-6-deoxy-D-mannose-3-dehydratase complexed with PLP-glutamate ketimine intermediate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000271biological_processpolysaccharide biosynthetic process
A0008483molecular_functiontransaminase activity
A0016740molecular_functiontransferase activity
A0030170molecular_functionpyridoxal phosphate binding
A0046872molecular_functionmetal ion binding
B0000271biological_processpolysaccharide biosynthetic process
B0008483molecular_functiontransaminase activity
B0016740molecular_functiontransferase activity
B0030170molecular_functionpyridoxal phosphate binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 601
ChainResidue
AGLU375
AASP378
AHOH684
AHOH685
AHOH686
AHOH687
BHOH561

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE PDG A 500
ChainResidue
ASER57
ASER87
ATRP88
ATHR90
ATHR91
AASP159
ACYS161
AGLU162
ASER183
APHE185
AHIS188
AHOH630
BHIS215
BTRP217
BASN248
BARG250
ASER55
AGLY56

site_idAC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE PDG B 501
ChainResidue
AHIS215
ATRP217
AASN248
AARG250
BSER55
BGLY56
BSER57
BSER87
BTRP88
BTHR91
BASP159
BGLU162
BSER183
BPHE185
BHIS188
BHOH523

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1cs1
ChainResidueDetails
ATRP88
AASP159

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1cs1
ChainResidueDetails
BTRP88
BASP159

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PDB entries from 2025-06-18

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