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2GMK

Crystal structure of onconase double mutant with spontaneously-assembled (AMP) 4 stack

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004519molecular_functionendonuclease activity
A0004540molecular_functionRNA nuclease activity
A0050830biological_processdefense response to Gram-positive bacterium
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE AMP A 940
ChainResidue
ALYS9
AHOH1058
AHOH1059
AHOH1072
AHOH1128
ALYS31
AILE52
ATHR60
ASER61
AAMP941
AHOH1015
AHOH1031
AHOH1053

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE AMP A 941
ChainResidue
ALYS9
AHIS10
AHIS97
APHE98
AVAL99
AAMP940
AAMP942
AHOH966
AHOH1029
AHOH1047
AHOH1051
AHOH1060
AHOH1072
AHOH1074
AHOH1089
AHOH1099

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE AMP A 942
ChainResidue
AARG40
AVAL99
AAMP941
AAMP943
AHOH1027
AHOH1030
AHOH1048
AHOH1049
AHOH1126

site_idAC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE AMP A 943
ChainResidue
AARG15
ATYR64
ASER72
AARG73
APRO74
ALYS81
AAMP942
AHOH968
AHOH981
AHOH982
AHOH997
AHOH1002
AHOH1007
AHOH1010
AHOH1017
AHOH1046
AHOH1048
AHOH1049
AHOH1086

Functional Information from PROSITE/UniProt
site_idPS00127
Number of Residues7
DetailsRNASE_PANCREATIC Pancreatic ribonuclease family signature. CKdkNTF
ChainResidueDetails
ACYS30-PHE36

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS10

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor
ChainResidueDetails
AHIS97

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING:
ChainResidueDetails
ALYS31

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Pyrrolidone carboxylic acid => ECO:0000269|PubMed:1985896
ChainResidueDetails
APCA1

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PDB entries from 2024-07-31

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