Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008837 | molecular_function | diaminopimelate epimerase activity |
A | 0009085 | biological_process | lysine biosynthetic process |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
A | 0016853 | molecular_function | isomerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE ZDP A 700 |
Chain | Residue |
A | ASN11 |
A | ASN190 |
A | GLU208 |
A | ARG209 |
A | CYS217 |
A | GLY218 |
A | SER219 |
A | GLN44 |
A | ASN64 |
A | VAL70 |
A | GLN72 |
A | CYS73 |
A | GLY74 |
A | ASN75 |
A | ASN157 |
site_id | AC2 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 694 |
Chain | Residue |
A | THR26 |
A | THR29 |
A | GLU124 |
A | ASN133 |
A | LYS134 |
A | PHE135 |
A | LEU274 |
A | HOH310 |
A | HOH497 |
A | HOH591 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACY A 695 |
Chain | Residue |
A | TYR139 |
A | ILE140 |
A | ARG184 |
A | HOH340 |
A | HOH373 |
A | HOH493 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE ACY A 696 |
Chain | Residue |
A | GLU69 |
A | SER71 |
A | GLN100 |
A | LYS101 |
A | HIS256 |
A | HOH319 |
A | HOH492 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACY A 697 |
Chain | Residue |
A | GLU187 |
A | ARG188 |
A | GLY255 |
A | HOH674 |
Functional Information from PROSITE/UniProt
site_id | PS01326 |
Number of Residues | 15 |
Details | DAP_EPIMERASE Diaminopimelate epimerase signature. NaDGSevsqCGNGaR |
Chain | Residue | Details |
A | ASN64-ARG78 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | CYS73 | |
Chain | Residue | Details |
A | CYS217 | |
Chain | Residue | Details |
A | ASN11 | |
A | ASN64 | |
A | GLY74 | |
A | ASN157 | |
A | ASN190 | |
A | GLU208 | |
A | GLY218 | |
Chain | Residue | Details |
A | GLN44 | |
Chain | Residue | Details |
A | HIS159 | |
A | GLU208 | |
Chain | Residue | Details |
A | TYR268 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1bwz |
Chain | Residue | Details |
A | GLU208 | |
A | CYS73 | |
A | CYS217 | |
A | HIS159 | |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 334 |
Chain | Residue | Details |
A | CYS73 | hydrogen bond acceptor, proton acceptor |
A | HIS159 | activator, electrostatic stabiliser |
A | GLU208 | activator, electrostatic stabiliser |
A | CYS217 | hydrogen bond donor, proton donor |
A | GLY220 | electrostatic stabiliser, hydrogen bond donor |