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2GJM

Crystal structure of Buffalo lactoperoxidase at 2.75A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000250|UniProtKB:P05164, ECO:0000255|PROSITE-ProRule:PRU00298
ChainResidueDetails
AHIS95

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: covalent => ECO:0000269|PubMed:19339248, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
AASP94
AGLU242

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00298, ECO:0000269|PubMed:19339248, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
ATHR168
APHE170
AASP172
ASER174
AASP96

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:19339248
ChainResidueDetails
AHIS336

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000250|UniProtKB:P05164, ECO:0000255|PROSITE-ProRule:PRU00298
ChainResidueDetails
AARG239

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:19339248, ECO:0000269|Ref.6
ChainResidueDetails
ASER182

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: 3'-nitrotyrosine => ECO:0000250|UniProtKB:P11678
ChainResidueDetails
ATYR350

site_idSWS_FT_FI8
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (high mannose) asparagine; alternate => ECO:0000269|PubMed:19339248, ECO:0000269|PubMed:30296068, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
AASN81

site_idSWS_FT_FI9
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (high mannose) asparagine => ECO:0000269|PubMed:19339248, ECO:0000269|PubMed:30296068, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
AASN189

site_idSWS_FT_FI10
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19339248, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
AASN225

site_idSWS_FT_FI11
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (hybrid) asparagine; alternate => ECO:0000269|PubMed:19339248, ECO:0000269|PubMed:30296068, ECO:0000269|Ref.5, ECO:0000269|Ref.6
ChainResidueDetails
AASN317

Catalytic Information from CSA
site_idMCSA1
Number of Residues9
DetailsM-CSA 944
ChainResidueDetails
AGLN91transition state stabiliser
AASP94alter redox potential, covalently attached
AASP96metal ligand
ATHR168metal ligand
APHE170metal ligand
AASP172metal ligand
ASER174metal ligand
AGLU242alter redox potential, covalently attached
AHIS336metal ligand

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PDB entries from 2024-06-12

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