2GFQ
Structure of Protein of Unknown Function PH0006 from Pyrococcus horikoshii
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016788 | molecular_function | hydrolase activity, acting on ester bonds |
| A | 0019478 | biological_process | D-amino acid catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051499 | molecular_function | D-aminoacyl-tRNA deacylase activity |
| A | 0106026 | molecular_function | Gly-tRNA(Ala) deacylase activity |
| A | 0106074 | biological_process | aminoacyl-tRNA metabolism involved in translational fidelity |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016788 | molecular_function | hydrolase activity, acting on ester bonds |
| B | 0019478 | biological_process | D-amino acid catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051499 | molecular_function | D-aminoacyl-tRNA deacylase activity |
| B | 0106026 | molecular_function | Gly-tRNA(Ala) deacylase activity |
| B | 0106074 | biological_process | aminoacyl-tRNA metabolism involved in translational fidelity |
| C | 0008270 | molecular_function | zinc ion binding |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016788 | molecular_function | hydrolase activity, acting on ester bonds |
| C | 0019478 | biological_process | D-amino acid catabolic process |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0051499 | molecular_function | D-aminoacyl-tRNA deacylase activity |
| C | 0106026 | molecular_function | Gly-tRNA(Ala) deacylase activity |
| C | 0106074 | biological_process | aminoacyl-tRNA metabolism involved in translational fidelity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2001 |
| Chain | Residue |
| B | GLY25 |
| B | ARG41 |
| B | HOH2286 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2002 |
| Chain | Residue |
| B | LYS27 |
| B | LYS40 |
| B | ARG41 |
| B | GLY42 |
| B | HOH2193 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2003 |
| Chain | Residue |
| A | LYS27 |
| A | HOH2067 |
| A | HOH2210 |
| A | HOH2332 |
| A | TYR-4 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2004 |
| Chain | Residue |
| A | ARG79 |
| A | SER81 |
| A | TRP162 |
| A | HOH2329 |
| A | HOH2375 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2005 |
| Chain | Residue |
| A | ARG186 |
| A | GLU240 |
| A | LYS241 |
| A | HOH2069 |
| A | HOH2286 |
| A | HOH2415 |
| A | HOH2423 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2006 |
| Chain | Residue |
| A | ARG207 |
| A | GLY211 |
| A | ASP212 |
| A | HOH2131 |
| A | HOH2299 |
| A | HOH2356 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2007 |
| Chain | Residue |
| B | ARG79 |
| B | SER81 |
| B | TRP162 |
| B | HOH2317 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2008 |
| Chain | Residue |
| B | ARG186 |
| B | GLU240 |
| B | LYS241 |
| B | HOH2077 |
| B | HOH2129 |
| B | HOH2356 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2009 |
| Chain | Residue |
| B | ARG257 |
| B | HOH2235 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2010 |
| Chain | Residue |
| A | ARG257 |
| A | HOH2192 |
| A | HOH2237 |
| A | HOH2428 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 2011 |
| Chain | Residue |
| C | ARG79 |
| C | SER81 |
| C | TRP162 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 2012 |
| Chain | Residue |
| A | SER82 |
| A | LYS83 |
| A | GLN84 |
| A | HOH2273 |
| A | HOH2419 |
| site_id | BC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2013 |
| Chain | Residue |
| A | SER262 |
| A | GLN265 |
| A | HOH2288 |
| B | ARG61 |
| B | HOH2161 |
| B | HOH2174 |
| B | HOH2307 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2014 |
| Chain | Residue |
| B | SER82 |
| B | LYS83 |
| B | GLN84 |
| B | HOH2195 |
| site_id | BC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE SO4 C 2015 |
| Chain | Residue |
| B | LYS221 |
| C | LYS19 |
| C | GLU22 |
| C | ASN23 |
| C | GLU169 |
| C | HOH2038 |
| C | HOH2104 |
| C | HOH2129 |
| C | HOH2195 |
| site_id | BC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 C 2016 |
| Chain | Residue |
| C | ARG186 |
| C | GLU240 |
| C | LYS241 |
| C | HOH2135 |
| C | HOH2169 |
| C | HOH2280 |
| site_id | BC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 C 2017 |
| Chain | Residue |
| C | GLN84 |
| C | GLY198 |
| C | HIS199 |
| C | TYR200 |
| C | HOH2047 |
| C | HOH2189 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 2018 |
| Chain | Residue |
| A | HIS92 |
| A | HIS141 |
| A | GLU154 |
| A | HOH2120 |
| A | HOH2410 |
| site_id | CC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG C 2019 |
| Chain | Residue |
| C | HIS92 |
| C | HIS141 |
| C | GLU154 |
| C | HOH2051 |
| C | HOH2198 |
| site_id | CC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 2020 |
| Chain | Residue |
| B | HIS141 |
| B | GLU154 |
| B | HOH2050 |
| B | HOH2293 |
| B | HIS92 |
| B | HIS140 |
