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2GDI

Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate

Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA X 121
ChainResidue
XA61
XHOH356
XHOH357
XHOH358
XHOH359

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA X 122
ChainResidue
XHOH396
XHOH403
XU64
XG65
XG66
XHOH380

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K X 123
ChainResidue
XG21
XG72
XHOH360
XHOH361

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K X 124
ChainResidue
XG21
XC22
XU71
XC73
XHOH365

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K X 125
ChainResidue
XC38
XU39
XA70
XU71
XC73
XHOH376

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG X 101
ChainResidue
XU59
XG60
XG78
XTPP100
XHOH488
XHOH489
XHOH490

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG X 102
ChainResidue
XA75
XTPP100
XHOH491
XHOH492
XHOH493
XHOH494

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG X 103
ChainResidue
XA41
XHOH495
XHOH496
XHOH497
XHOH498
XHOH499

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG Y 111
ChainResidue
YU59
YG60
YG78
YTPP100
YHOH500
YHOH501
YHOH502

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG Y 112
ChainResidue
YTPP100
YHOH503
YHOH504
YHOH505
YHOH506

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG Y 113
ChainResidue
YA41
YHOH507
YHOH508
YHOH509
YHOH510
YHOH511

site_idBC3
Number of Residues23
DetailsBINDING SITE FOR RESIDUE TPP X 100
ChainResidue
XG19
XG40
XG42
XA43
XC57
XC58
XG72
XC73
XC77
XG78
XMG101
XMG102
XHOH381
XHOH387
XHOH406
XHOH429
XHOH443
XHOH458
XHOH488
XHOH489
XHOH492
XHOH493
XHOH494

site_idBC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE TPP Y 100
ChainResidue
YHOH339
YHOH501
YHOH503
YHOH505
YHOH506
YG19
YG40
YG42
YA43
YC57
YC58
YG72
YC73
YC77
YG78
YMG111
YMG112
YHOH257

227344

PDB entries from 2024-11-13

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