2G80
Crystal structure of UTR4 protein (Unknown transcript 4 protein) (yel038w) from Saccharomyces cerevisiae at 2.28 A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0008652 | biological_process | amino acid biosynthetic process |
| A | 0009086 | biological_process | methionine biosynthetic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0019509 | biological_process | L-methionine salvage from methylthioadenosine |
| A | 0043874 | molecular_function | acireductone synthase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0008652 | biological_process | amino acid biosynthetic process |
| B | 0009086 | biological_process | methionine biosynthetic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0019509 | biological_process | L-methionine salvage from methylthioadenosine |
| B | 0043874 | molecular_function | acireductone synthase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0008652 | biological_process | amino acid biosynthetic process |
| C | 0009086 | biological_process | methionine biosynthetic process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0019509 | biological_process | L-methionine salvage from methylthioadenosine |
| C | 0043874 | molecular_function | acireductone synthase activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0008652 | biological_process | amino acid biosynthetic process |
| D | 0009086 | biological_process | methionine biosynthetic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0019509 | biological_process | L-methionine salvage from methylthioadenosine |
| D | 0043874 | molecular_function | acireductone synthase activity |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 500 |
| Chain | Residue |
| A | ASP25 |
| A | GLU27 |
| A | ASP200 |
| A | HOH509 |
| A | HOH517 |
| A | HOH593 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 500 |
| Chain | Residue |
| B | HOH515 |
| B | HOH548 |
| B | HOH559 |
| B | ASP25 |
| B | GLU27 |
| B | ASP200 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG C 500 |
| Chain | Residue |
| C | ASP25 |
| C | GLU27 |
| C | ASP200 |
| C | HOH510 |
| C | HOH511 |
| C | HOH548 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG D 500 |
| Chain | Residue |
| D | ASP25 |
| D | GLU27 |
| D | ASP200 |
| D | HOH562 |
| D | HOH563 |
| D | HOH564 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE MG C 501 |
| Chain | Residue |
| A | HIS79 |
| A | ASP90 |
| A | HOH575 |
| A | HOH601 |
| C | ASP90 |
| C | HOH572 |
| C | HOH573 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG D 501 |
| Chain | Residue |
| D | ASP90 |
| D | HOH541 |
| D | HOH565 |
| D | HOH566 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PE4 A 501 |
| Chain | Residue |
| A | PRO113 |
| A | VAL114 |
| A | TYR115 |
| A | GLN147 |
| B | GLU38 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL D 502 |
| Chain | Residue |
| C | GLU38 |
| D | PRO113 |
| D | GLN147 |
| D | PRO149 |
| D | HOH504 |
| D | HOH533 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE GOL C 502 |
| Chain | Residue |
| C | ALA78 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03117","evidenceCode":"ECO:0000255"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2006","submissionDatabase":"PDB data bank","title":"Crystal structure of UTR4 protein (unknown transcript 4 protein) (YEL038w) from Saccharomyces cerevisiae at 2.28 A resolution.","authoringGroup":["Joint center for structural genomics (JCSG)"]}}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03117","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
