2G7M
Crystal structure of B. fragilis N-succinylornithine transcarbamylase P90E mutant complexed with carbamoyl phosphate and N-acetylnorvaline
Functional Information from GO Data
Chain | GOid | namespace | contents |
C | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
C | 0006520 | biological_process | amino acid metabolic process |
C | 0006526 | biological_process | arginine biosynthetic process |
C | 0006591 | biological_process | ornithine metabolic process |
C | 0016597 | molecular_function | amino acid binding |
C | 0016740 | molecular_function | transferase activity |
C | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
D | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
D | 0006520 | biological_process | amino acid metabolic process |
D | 0006526 | biological_process | arginine biosynthetic process |
D | 0006591 | biological_process | ornithine metabolic process |
D | 0016597 | molecular_function | amino acid binding |
D | 0016740 | molecular_function | transferase activity |
D | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
E | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
E | 0006520 | biological_process | amino acid metabolic process |
E | 0006526 | biological_process | arginine biosynthetic process |
E | 0006591 | biological_process | ornithine metabolic process |
E | 0016597 | molecular_function | amino acid binding |
E | 0016740 | molecular_function | transferase activity |
E | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
X | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
X | 0006520 | biological_process | amino acid metabolic process |
X | 0006526 | biological_process | arginine biosynthetic process |
X | 0006591 | biological_process | ornithine metabolic process |
X | 0016597 | molecular_function | amino acid binding |
X | 0016740 | molecular_function | transferase activity |
X | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
Y | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
Y | 0006520 | biological_process | amino acid metabolic process |
Y | 0006526 | biological_process | arginine biosynthetic process |
Y | 0006591 | biological_process | ornithine metabolic process |
Y | 0016597 | molecular_function | amino acid binding |
Y | 0016740 | molecular_function | transferase activity |
Y | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
Z | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
Z | 0006520 | biological_process | amino acid metabolic process |
Z | 0006526 | biological_process | arginine biosynthetic process |
Z | 0006591 | biological_process | ornithine metabolic process |
Z | 0016597 | molecular_function | amino acid binding |
Z | 0016740 | molecular_function | transferase activity |
Z | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 Y 355 |
Chain | Residue |
X | ARG35 |
Y | ARG35 |
Z | ARG35 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 D 356 |
Chain | Residue |
C | ARG35 |
D | ARG35 |
E | ARG35 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE AN0 X 345 |
Chain | Residue |
X | LEU180 |
X | LYS236 |
X | LEU275 |
X | CP346 |
Z | TRP75 |
Z | GLU90 |
X | PHE112 |
X | GLU142 |
X | ARG178 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP X 346 |
Chain | Residue |
X | SER47 |
X | LEU48 |
X | ARG49 |
X | THR50 |
X | ARG110 |
X | HIS147 |
X | GLN150 |
X | CYS274 |
X | LEU275 |
X | ARG302 |
X | AN0345 |
Z | TRP75 |
site_id | AC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE AN0 Y 445 |
Chain | Residue |
X | TRP75 |
X | GLU90 |
Y | PHE112 |
Y | GLU142 |
Y | ARG178 |
Y | LEU180 |
Y | PRO181 |
Y | LYS236 |
Y | CP446 |
Y | HOH488 |
site_id | AC6 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP Y 446 |
Chain | Residue |
X | TRP75 |
Y | SER47 |
Y | LEU48 |
Y | ARG49 |
Y | THR50 |
Y | ARG110 |
Y | HIS147 |
Y | GLN150 |
Y | CYS274 |
Y | LEU275 |
Y | ARG302 |
Y | AN0445 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE AN0 Z 545 |
Chain | Residue |
Y | TRP75 |
Y | GLU90 |
Z | PHE112 |
Z | GLU142 |
Z | LEU180 |
Z | PRO181 |
Z | LYS236 |
Z | CP546 |
site_id | AC8 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP Z 546 |
Chain | Residue |
Y | TRP75 |
Z | SER47 |
Z | LEU48 |
Z | ARG49 |
Z | THR50 |
Z | ARG110 |
Z | HIS147 |
Z | GLN150 |
Z | CYS274 |
Z | LEU275 |
Z | ARG302 |
Z | AN0545 |
site_id | AC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE AN0 C 645 |
Chain | Residue |
C | ARG110 |
C | PHE112 |
C | GLU142 |
C | PRO181 |
C | LYS236 |
C | CP646 |
E | TRP75 |
E | GLU90 |
site_id | BC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP C 646 |
Chain | Residue |
C | SER47 |
C | LEU48 |
C | ARG49 |
C | THR50 |
C | ARG110 |
C | HIS147 |
C | GLN150 |
C | CYS274 |
C | LEU275 |
C | ARG302 |
C | AN0645 |
E | TRP75 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE AN0 D 745 |
Chain | Residue |
C | TRP75 |
C | GLU90 |
D | GLU142 |
D | ARG178 |
D | VAL184 |
D | LYS236 |
D | CP746 |
site_id | BC3 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP D 746 |
Chain | Residue |
D | ARG49 |
D | THR50 |
D | ARG110 |
D | HIS147 |
D | GLN150 |
D | CYS274 |
D | LEU275 |
D | ARG302 |
D | AN0745 |
C | TRP75 |
D | SER47 |
D | LEU48 |
site_id | BC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE AN0 E 845 |
Chain | Residue |
D | TRP75 |
D | GLU90 |
E | PHE112 |
E | GLU142 |
E | PRO181 |
E | LYS236 |
E | CP846 |
site_id | BC5 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CP E 846 |
Chain | Residue |
D | TRP75 |
E | SER47 |
E | LEU48 |
E | ARG49 |
E | THR50 |
E | ARG110 |
E | HIS147 |
E | GLN150 |
E | CYS274 |
E | LEU275 |
E | ARG302 |
E | AN0845 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
X | ARG49 | |
X | ARG110 | |
X | HIS147 | |
X | THR50 |
site_id | CSA2 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
Y | ARG49 | |
Y | ARG110 | |
Y | HIS147 | |
Y | THR50 |
site_id | CSA3 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
Z | ARG49 | |
Z | ARG110 | |
Z | HIS147 | |
Z | THR50 |
site_id | CSA4 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
C | ARG49 | |
C | ARG110 | |
C | HIS147 | |
C | THR50 |
site_id | CSA5 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
D | ARG49 | |
D | ARG110 | |
D | HIS147 | |
D | THR50 |
site_id | CSA6 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1at1 |
Chain | Residue | Details |
E | ARG49 | |
E | ARG110 | |
E | HIS147 | |
E | THR50 |