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2G09

X-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005737cellular_componentcytoplasm
A0008253molecular_function5'-nucleotidase activity
B0000287molecular_functionmagnesium ion binding
B0005737cellular_componentcytoplasm
B0008253molecular_function5'-nucleotidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 901
ChainResidue
AASP49
AASP51
AASP238
APO4903
AHOH1119
AHOH1254

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 902
ChainResidue
BPO4904
BHOH1265
BHOH1309
BASP49
BASP51
BASP238

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 A 903
ChainResidue
AASP49
APHE50
AASP51
ASER164
AALA165
AGLY166
ALYS213
AMG901
AHOH930
AHOH1046

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 B 904
ChainResidue
BASP49
BPHE50
BASP51
BSER164
BALA165
BGLY166
BLYS213
BMG902
BHOH948
BHOH1037

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PIN A 905
ChainResidue
AGLN294
ALYS295
ALEU297
AHOH1066
AHOH1135
AHOH1146

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PIN B 906
ChainResidue
BGLN294
BLYS295
BLEU297
BHOH1216
BHOH1299

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"16672222","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"16672222","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16672222","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q9W197","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"21183079","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

244349

PDB entries from 2025-11-05

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