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2FN3

High resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003824molecular_functioncatalytic activity
A0003984molecular_functionacetolactate synthase activity
A0009056biological_processcatabolic process
A0016831molecular_functioncarboxy-lyase activity
A0018924biological_processmandelate metabolic process
A0019596biological_processmandelate catabolic process
A0019752biological_processcarboxylic acid metabolic process
A0030976molecular_functionthiamine pyrophosphate binding
A0046872molecular_functionmetal ion binding
A0050660molecular_functionflavin adenine dinucleotide binding
A0050695molecular_functionbenzoylformate decarboxylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MG A 531
ChainResidue
AASN117
AASN117
ALEU118
ALEU118
AARG120
AARG120
AHOH801
AHOH801

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 532
ChainResidue
AASN455
ATHR457
ATZD530
AHOH535
AASP428

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 533
ChainResidue
AGLU37
AASP364
AHOH691
AHOH703
AHOH838

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 534
ChainResidue
AASP347
AALA416
AHOH698
AHOH701
AHOH711
AHOH772
AHOH901

site_idAC5
Number of Residues23
DetailsBINDING SITE FOR RESIDUE TZD A 530
ChainResidue
AASN23
APRO24
AGLY25
AGLU47
AHIS70
AASN77
ATHR377
ASER378
AGLY401
ALEU403
AGLY427
AASP428
AGLY429
ASER430
ATYR433
AASN455
ATHR457
ATYR458
AGLY459
AALA460
ACA532
AHOH542
AHOH627

Functional Information from PROSITE/UniProt
site_idPS00187
Number of Residues20
DetailsTPP_ENZYMES Thiamine pyrophosphate enzymes signature. IGvqlaePerqvIaViGDGS
ChainResidueDetails
AILE411-SER430

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AASN117
ALEU118
AARG120
AASP428
AASN455
ATHR457

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1bfd
ChainResidueDetails
AGLU28
AHIS281
AHIS70

site_idMCSA1
Number of Residues7
DetailsM-CSA 220
ChainResidueDetails
AGLY25electrostatic stabiliser, hydrogen bond donor
AALA26electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AGLU28electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AGLU47hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS70electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AHIS281hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AGLY401electrostatic stabiliser, hydrogen bond acceptor

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PDB entries from 2024-11-13

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