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2FJ1

Crystal Structure Analysis of Tet Repressor (class D) in Complex with 7-Chlortetracycline-Nickel(II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000976molecular_functiontranscription cis-regulatory region binding
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0006355biological_processregulation of DNA-templated transcription
A0045892biological_processnegative regulation of DNA-templated transcription
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NI A 223
ChainResidue
AHIS100
ACTC222
AHOH224
AHOH225
AHOH226

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 301
ChainResidue
AHOH400
AARG3
ALEU4
AGLN76
AARG80

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 302
ChainResidue
AARG3
ASER74

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 303
ChainResidue
AARG118
AARG118

site_idAC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE CTC A 222
ChainResidue
AHIS64
ASER67
AASN82
APHE86
AHIS100
AARG104
AVAL113
AGLN116
AILE134
ASER138
ANI223
AHOH224
AHOH225
AHOH226
AHOH305
AHOH317

Functional Information from PROSITE/UniProt
site_idPS01081
Number of Residues32
DetailsHTH_TETR_1 TetR-type HTH domain signature. GIdglTTrkLaqklgIEqPtLYwHVkNKralL
ChainResidueDetails
AGLY21-LEU52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues19
DetailsDNA_BIND: H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00335
ChainResidueDetails
ATHR26-VAL45

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:8153629, ECO:0007744|PDB:2TRT
ChainResidueDetails
AHIS64
AASN82
AHIS100

222036

PDB entries from 2024-07-03

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