2FAR
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN A 501 |
| Chain | Residue |
| A | HOH454 |
| A | HOH485 |
| A | MN502 |
| A | ASP669 |
| A | ASP671 |
| A | DTP1304 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MN A 502 |
| Chain | Residue |
| A | ASP671 |
| A | ASP759 |
| A | HOH454 |
| A | MN501 |
| A | ASP669 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN B 503 |
| Chain | Residue |
| B | HOH145 |
| B | HOH415 |
| B | MN504 |
| B | ASP669 |
| B | ASP671 |
| B | DTP1302 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN B 504 |
| Chain | Residue |
| B | HOH145 |
| B | HOH300 |
| B | MN503 |
| B | ASP669 |
| B | ASP671 |
| B | ASP759 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1301 |
| Chain | Residue |
| A | HOH162 |
| B | HOH175 |
| B | HOH330 |
| B | SER552 |
| B | HIS553 |
| B | ARG556 |
| B | LYS566 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1302 |
| Chain | Residue |
| A | HOH84 |
| A | HOH325 |
| A | SER552 |
| A | HIS553 |
| A | ARG556 |
| A | LYS566 |
| B | HOH488 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1303 |
| Chain | Residue |
| A | HOH212 |
| A | ARG750 |
| A | ASN751 |
| B | ARG750 |
| B | ASN751 |
| site_id | AC8 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DTP B 1302 |
| Chain | Residue |
| B | HOH77 |
| B | HOH145 |
| B | HOH404 |
| B | HOH415 |
| B | HOH498 |
| B | HOH499 |
| B | MN503 |
| B | ASP669 |
| B | ASP671 |
| B | SER704 |
| B | LYS707 |
| B | GLY708 |
| B | HIS710 |
| B | ARG762 |
| B | ARG776 |
| B | ARG778 |
| site_id | AC9 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE DTP A 1304 |
| Chain | Residue |
| A | HOH32 |
| A | HOH315 |
| A | HOH454 |
| A | HOH485 |
| A | HOH492 |
| A | HOH493 |
| A | HOH494 |
| A | MN501 |
| A | ASP669 |
| A | ASP671 |
| A | SER704 |
| A | LYS707 |
| A | GLY708 |
| A | HIS710 |
| A | ARG762 |
| A | ARG776 |
| A | ALA777 |
| A | ARG778 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 488 |
| Details | Region: {"description":"DNA repair polymerase domain (Pol)"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 22 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"16446439","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"16446439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20616014","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
